Mingyang Lu

Dongya Jia , Mingyang Lu , Kwang Hwa Jung , Jun Hyoung Park
Proceedings of the National Academy of Sciences of the United States of America 116 ( 9) 3909 -3918

195

2019

The Role of Exosome-Mediated Cell-Cell Communication in Inducing Phenotypic Changes

Mingyang Lu , Michela Capello , Herbert Levine , Samir M. Hanash
Biophysical Journal 110 ( 3)

2016

PIM: phase integrated method for normal mode analysis of biomolecules in a crystalline environment.

Mingyang Lu , Jianpeng Ma
Journal of Molecular Biology 425 ( 6) 1082 -1098

2013

Modeling a gene regulatory network of EMT hybrid states for mouse embryonic skin cells

Dan Ramirez , Vivek Kohar , Ataur Katebi , Mingyang Lu
bioRxiv 799908

2019

OPUS-PSP: an orientation-dependent statistical all-atom potential derived from side-chain packing.

Mingyang Lu , Athanasios D. Dousis , Jianpeng Ma
Journal of Molecular Biology 376 ( 1) 288 -301

198

2008

Random Parametric Perturbations of Gene Regulatory Circuit Uncover State Transitions in Cell Cycle.

Ataur Katebi , Vivek Kohar , Mingyang Lu
iScience 23 ( 6) 101150

2020

Toward Modeling Context-Specific EMT Regulatory Networks Using Temporal Single Cell RNA-Seq Data.

Daniel Ramirez , Vivek Kohar , Mingyang Lu
Frontiers in Molecular Biosciences 7 54

2020

Decoding the mechanisms underlying cell-fate decision-making during stem cell differentiation by random circuit perturbation.

Bin Huang , Mingyang Lu , Madeline Galbraith , Herbert Levine
Journal of the Royal Society Interface 17 ( 169) 20200500

2020

Towards elucidating the connection between epithelial-mesenchymal transitions and stemness.

Mohit Kumar Jolly , Bin Huang , Mingyang Lu , Sendurai A. Mani
Journal of the Royal Society Interface 11 ( 101) 20140962 -20140962

167

2014

Modeling Epithelial-Mesenchymal Transitions in Metastatic Cancer

Mingyang Lu , Mohit Kumar Jolly , Samir M. Hannash , Herbert Levine
Biophysical Journal 108 ( 2)

2015

A New Method for Coarse-Grained Elastic Normal-Mode Analysis.

Mingyang Lu , Billy Poon , Jianpeng Ma
Journal of Chemical Theory and Computation 2 ( 3) 464 -471

2006

Abstract B2-49: Coupled cellular decision-making of EMT and stemness: A bottom-up regulatory model

Mohit Kumar Jolly , Bin Huang , Mingyang Lu , Sendurai A Mani
Cancer Research 75

2015

The role of shape in determining molecular motions.

Mingyang Lu , Jianpeng Ma
Biophysical Journal 89 ( 4) 2395 -2401

129

2005

Construction of a Self-Consistent Landscape for Multistable Gene Regulatory Circuits

Mingyang Lu , Jose Onuchic , Eshel Ben-Jacob
Biophysical Journal 106 ( 2) 379a

2014

Multistability in GTPase-Based Decision Circuits

Bin Huang , Mingyang Lu , Mohit Kumar Jolly , Jose Onuchic
Biophysical Journal 106 ( 2) 379a -380a

2014

Role of noise and parametric variation in the dynamics of gene regulatory circuits.

Vivek Kohar , Mingyang Lu
npj Systems Biology and Applications 4 ( 1) 40

2018

Construction of an effective landscape for multistate genetic switches.

Mingyang Lu , José Onuchic , Eshel Ben-Jacob
Physical Review Letters 113 ( 7) 078102

2014

RACIPE: a computational tool for modeling gene regulatory circuits using randomization.

Bin Huang , Dongya Jia , Jingchen Feng , Herbert Levine
BMC Systems Biology 12 ( 1) 74 -74

2018

computational biophysics

computational systems biology

Mingyang Lu

引用次数

出版物: 78

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