Assessment of methods for predicting the effects of PTEN and TPMT protein variants.

Vikas Pejaver , Giulia Babbi , Rita Casadio , Lukas Folkman
Human Mutation 40 ( 9) 1495 -1506

14
2019
Assessing the performance of in silico methods for predicting the pathogenicity of variants in the gene CHEK2, among Hispanic females with breast cancer.

Alin Voskanian , Panagiotis Katsonis , Olivier Lichtarge , Vikas Pejaver
Human Mutation 40 ( 9) 1612 -1622

5
2019
Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI-5

Alexander Miguel Monzon , Marco Carraro , Luigi Chiricosta , Francesco Reggiani
Human Mutation 40 ( 9) 1474 -1485

4
2019
Assessing computational predictions of the phenotypic effect of cystathionine-beta-synthase variants.

Laura Kasak , Constantina Bakolitsa , Zhiqiang Hu , Changhua Yu
Human Mutation 40 ( 9) 1530 -1545

3
2019
Assessment of predicted enzymatic activity of α-N-acetylglucosaminidase variants of unknown significance for CAGI 2016.

Wyatt T Clark , Laura Kasak , Constantina Bakolitsa , Zhiqiang Hu
Human Mutation 40 ( 9) 1519 -1529

3
2019
The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013

Jeroen de Ridder , Yana Bromberg , Magali Michaut , Venkata P. Satagopam
PLoS Computational Biology 9 ( 11) e1003350

1
2013
Common sequence variants affect molecular function more than rare variants

Yannick Mahlich , Jonas Reeb , Maximilian Hecht , Maria Schelling
Scientific Reports 7 ( 1) 1608 -1608

15
2017
Tightening the (neural) net for protein structure prediction

Yana Bromberg
Nature Reviews Genetics 23 ( 6) 322 -323

2022
Predicting embryonic aneuploidy rate in IVF patients using whole-exome sequencing

Siqi Sun , Maximilian Miller , Yanran Wang , Katarzyna M Tyc
Human genetics 141 ( 10) 1615 -1627

3
2022
Evolution of the SARS‐CoV‐2 proteome in three dimensions (3D) during the first 6 months of the COVID‐19 pandemic

Joseph H Lubin , Christine Zardecki , Elliott M Dolan , Changpeng Lu
Proteins: Structure, Function, and Bioinformatics 90 ( 5) 1054 -1080

45
2022
Comprehensive in silico mutagenesis highlights functionally important residues in proteins

Yana Bromberg , Burkhard Rost
Bioinformatics 24 ( 16) i207 -i212

74
2008
Learning from the unknown: exploring the range of bacterial functionality

Yannick Mahlich , Chengsheng Zhu , Henri Chung , Pavan K Velaga
Nucleic Acids Research 51 ( 19) 10162 -10175

2
2023
Computational interpretation of human genetic variation

Yana Bromberg , Predrag Radivojac
Human Genetics 141 ( 10) 1545 -1548

2022
The Proceedings of 2017 {IEEE} International Conference on Bioinformatics and Biomedicine

Xiaohua Hu , Chi-Ren Shyu , Yana Bromberg , Jean X Gao
IEEE

13
2017
Deep carbon through deep time: Data-driven insights

Robert M Hazen , Yana Bromberg , Robert T Downs , Ahmed Eleish
Cambridge University Press 620 -652

10
2019
An Interdisciplinary Perspective of the Built-Environment Microbiome

John S McAlister , Michael J Blum , Yana Bromberg , Nina H Fefferman
arXiv preprint arXiv:2405.02593

2024