Publications (by theme)

Patrice KOEHL , H Fushing , H Wang , K VanderWaal
Trans. Pattern Anal. Mach. Intell 34 2158 -2163

2012
IMPRINTS

SAY SONG GOH , JI HUI , PATRICE KOEHL

Mortal Kombat: modeling amyloid fibrils and health implications

Jerome Waldispuhl , Marc Delarue , Patrice Koehl , Henri Orland
The FASEB Journal 27

2013
Computational Topology for Structural Molecular Biology

Herbert Edelsbrunner , Patrice Koehl
Chapman and Hall/CRC 1709 -1735

2017
A smooth knowledge based potential for protein structure refinement

Patrice Koehl , Peter Røgen
european conference on computational biology

2010
Physics approach to the variable-mass optimal-transport problem.

Marc Delarue , Patrice Koehl , Henri Orland
Physical Review E 103 ( 1) 012113

7
2021
Fast computation of exact solutions of generic and degenerate assignment problems.

Patrice Koehl , Henri Orland
Physical Review E 103 ( 4) 042101 -042101

2021
Simultaneous Identification of Multiple Binding Sites in Proteins: A Statistical Mechanics Approach.

Marc Delarue , Patrice Koehl , Henri Orland
Journal of Physical Chemistry B 125 ( 19) 5052 -5067

2021
Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.

Haidai Hu , Kenichi Ataka , Anaïs Menny , Zaineb Fourati
Proceedings of the National Academy of Sciences of the United States of America 115 ( 52) 201813378

22
2018
AquaSAXS: a web server for computation and fitting of SAXS profiles with non-uniformally hydrated atomic models

Frédéric Poitevin , Henri Orland , Sebastian Doniach , Patrice Koehl
Nucleic Acids Research 39 184 -189

77
2011
A brighter future for protein structure prediction.

Patrice Koehl , Michael Levitt
Nature Structural & Molecular Biology 6 ( 2) 108 -111

144
1999
Incorporating dipolar solvents with variable density in Poisson-Boltzmann electrostatics.

Cyril Azuara , Henri Orland , Michael Bon , Patrice Koehl
Biophysical Journal 95 ( 12) 5587 -5605

96
2008
Small libraries of protein fragments model native protein structures accurately.

Rachel Kolodny , Patrice Koehl , Leonidas Guibas , Michael Levitt
Journal of Molecular Biology 323 ( 2) 297 -307

181
2002
Sequence Variations within Protein Families are Linearly Related to Structural Variations

Patrice Koehl , Michael Levitt
Journal of Molecular Biology 323 ( 3) 551 -562

38
2002
Structural Alphabets for Protein Structure Classification: A Comparison Study

Quan Le , Gianluca Pollastri , Patrice Koehl
Journal of Molecular Biology 387 ( 2) 431 -450

33
2009
Computational assembly of polymorphic amyloid fibrils reveals stable aggregates.

Mohamed Raef Smaoui , Frédéric Poitevin , Marc Delarue , Patrice Koehl
Biophysical Journal 104 ( 3) 683 -693

32
2013
Inverse Kinematics in Biology: The Protein Loop Closure Problem

Rachel Kolodny , Leonidas Guibas , Michael Levitt , Patrice Koehl
The International Journal of Robotics Research 24 151 -163

115
2005
Strong structural effect of the position of a single acetylaminofluorene adduct within a mutation hot spot.

Pascale Valladier , Jean-François Lefèvre , Robert P.P. Fuchs , Patrice Koehl
Nucleic Acids Research 17 ( 23) 9531 -9541

32
1989