In silico prediction of housekeeping long intergenic non-coding RNAs reveals HKlincR1 as an essential player in lung cancer cell survival

Memon Danish , Bi Jing , Crispin J Miller
Scientific Reports (Nature Publisher Group) 9 ( 1)

2019
Copy number aberrations drive kinase rewiring, leading to genetic vulnerabilities in cancer.

Martin L. Miller , David Ochoa , Pedro Beltrao , Clive S. D’Santos
Cell Reports 35 ( 7) 109155

2021
Mutation pattern analysis reveals polygenic mini-drivers associated with relapse after surgery in lung adenocarcinoma

Laura Bennett , Matthew Howell , Danish Memon , Chris Smowton
Scientific Reports 8 ( 1) 14830 -14830

1
2018
Comprehensive variant effect predictions of single nucleotide variants in model organisms

Omar Wagih , Bede Busby , Marco Galardini , Danish Memon
bioRxiv 313031

3
2018
QuantiGene Plex Represents a Promising Diagnostic Tool for Cell-of-Origin Subtyping of Diffuse Large B-Cell Lymphoma

John S. Hall , Suzanne Usher , Richard J. Byers , Rebekah C. Higgins
The Journal of Molecular Diagnostics 17 ( 4) 402 -411

11
2015
Abstract C65: Identifying mechanisms of macrophage-mediated metastasis and therapy resistance in PDAC

Tony J. Wu , Oliver Cast , Danish Memon , Alejandro Jimenez-Sanchez
Cancer Research 79

2019
A resource of variant effect predictions of single nucleotide variants in model organisms.

Omar Wagih , Marco Galardini , Bede P Busby , Danish Memon
Molecular Systems Biology 14 ( 12)

75
2018
Peripheral nerve morphogenesis induced by scaffold micropatterning

Federica Cerri , Luca Salvatore , Danish Memon , Filippo Martinelli Boneschi
Biomaterials 35 ( 13) 4035 -4045

32
2014
A global analysis of adaptive evolution of operons in cyanobacteria.

Danish Memon , Abhay K. Singh , Himadri B. Pakrasi , Pramod P. Wangikar
Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 103 ( 2) 331 -346

22
2013
Acquired resistance to PD-1 blockade in NSCLC.

Adam Jacob Schoenfeld , Hira Rizvi , Danish Memon , Jia Luo
Journal of Clinical Oncology 38 9621 -9621

1
2020
Heterogeneous Tumor-Immune Microenvironments among Differentially Growing Metastases in an Ovarian Cancer Patient

Alejandro Jiménez-Sánchez , Danish Memon , Stephane Pourpe , Harini Veeraraghavan
Cell 170 ( 5) 927 -938

384
2017
The Global Phosphorylation Landscape of SARS-CoV-2 Infection.

Mehdi Bouhaddou , Danish Memon , Bjoern Meyer , Kris M White
Cell 182 ( 3)

667
2020
Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.

David E Gordon , Joseph Hiatt , Mehdi Bouhaddou , Veronica V Rezelj
Science 370 ( 6521)

456
2020
A SARS-CoV-2 protein interaction map reveals targets for drug repurposing.

David E Gordon , Gwendolyn M Jang , Mehdi Bouhaddou , Jiewei Xu
Nature 583 ( 7816) 459 -468

3,580
2020
Hypoxia-driven splicing into noncoding isoforms regulates the DNA damage response.

Danish Memon , Keren Dawson , Christopher SF Smowton , Wei Xing
npj Genomic Medicine 1 ( 1) 16020 -16020

16
2016
Towards a systematic map of the functional role of protein phosphorylation

Cristina Viéitez , Bede P. Busby , David Ochoa , André Mateus
bioRxiv 872770

3
2019
High-throughput functional characterization of protein phosphorylation sites in yeast

Cristina Viéitez , Bede P Busby , David Ochoa , André Mateus
Nature biotechnology 40 ( 3) 382 -390

9
2022
Systematic discovery of biomolecular condensate-specific protein phosphorylation

Sindhuja Sridharan , Alberto Hernandez-Armendariz , Nils Kurzawa , Clement M Potel
Nature Chemical Biology 18 ( 10) 1104 -1114

8
2022