Self-Assembly of Patchy Spherocylinders

N.S. Bieler , T.P.J. Knowles , Robert Vácha , D Frenkel

2012
Molecular Simulations of Surfaces of Aqueous Solutions

Robert Vácha
Univerzita Karlova, Přírodovědecká fakulta

2009
Phosphorylation-induced changes in the PDZ domain of Dishevelled 3.

Robert Vácha , Robert Vácha , Vítězslav Bryja , Vítězslav Bryja
Scientific Reports 11 ( 1) 1484 -1484

2021
Selecting Collective Variables and Free-Energy Methods for Peptide Translocation across Membranes.

Robert Vácha , Robert Vácha , Radim Brožek , Radim Brožek
Journal of Chemical Information and Modeling 61 ( 2) 819 -830

2
2021
Enhanced translocation of amphiphilic peptides across membranes by transmembrane proteins.

Robert Vácha , Robert Vácha , Ivo Kabelka , Ivo Kabelka
Biophysical Journal 120 ( 11) 2296 -2305

2021
Advances in Molecular Understanding of α-Helical Membrane-Active Peptides.

Robert Vácha , Robert Vácha , Ivo Kabelka , Ivo Kabelka
Accounts of Chemical Research 54 ( 9) 2196 -2204

24
2021
Molecular Model of a Cell Plasma Membrane With an Asymmetric Multicomponent Composition: Water Permeation and Ion Effects

Robert Vácha , Max L. Berkowitz , Pavel Jungwirth
Biophysical Journal 96 ( 11) 4493 -4501

62
2009
Ion specific effects of sodium and potassium on the catalytic activity of HIV-1 protease.

Jan Heyda , Jana Pokorná , Luboš Vrbka , Robert Vácha
Physical Chemistry Chemical Physics 11 ( 35) 7599 -7604

28
2009
Receptor-mediated endocytosis of nanoparticles of various shapes.

Robert Vácha , Francisco J. Martinez-Veracoechea , Daan Frenkel
Nano Letters 11 ( 12) 5391 -5395

491
2011
Reply to comments on Frontiers Article ‘Behavior of hydroxide at the water/vapor interface’

Bernd Winter , Manfred Faubel , Robert Vácha , Pavel Jungwirth
Chemical Physics Letters 481 ( 1) 19 -21

21
2009
Behavior of hydroxide at the water/vapor interface

Bernd Winter , Manfred Faubel , Robert Vácha , Pavel Jungwirth
Chemical Physics Letters 474 ( 4) 241 -247

92
2009
Study of the betulin molecule in a water environment; ab initio and molecular simulation calculations

Miroslav Pospíšil , Petr Kovář , Robert Vácha , Michal Svoboda
Journal of Molecular Modeling 18 ( 1) 367 -376

3
2012
Autoionization at the surface of neat water : is the top layer pH neutral , basic , or acidic?

Robert Vácha , Victoria Buch , Anne Milet , J. Paul Devlin
Physical Chemistry Chemical Physics 9 ( 34) 4736 -4747

127
2007
Effect of helical kink in antimicrobial peptides on membrane pore formation.

Alzbeta Tuerkova , Ivo Kabelka , Tereza Králová , Lukáš Sukeník
eLife 9

4
2020
Water Structuring and Hydroxide Ion Binding at the Interface between Water and Hydrophobic Walls of Varying Rigidity and van der Waals Interactions

Robert Vácha , Ronen Zangi , Jan B. F. N. Engberts , Pavel Jungwirth
Journal of Physical Chemistry C 112 ( 20) 7689 -7692

44
2008
Ion pairing as a possible clue for discriminating between sodium and potassium in biological and other complex environments.

Barbara Jagoda-Cwiklik , Robert Vácha , Mikael Lund , Monika Srebro
Journal of Physical Chemistry B 111 ( 51) 14077 -14079

66
2007
Composition- and Size-Controlled Cyclic Self-Assembly by Solvent- and C60-Responsive Self-Sorting

Qixun Shi , Karl-Erik Bergquist , Ruiping Huo , Jilai Li
Journal of the American Chemical Society 135 ( 40) 15263 -15268

15
2013
Connecting Macroscopic Observables and Microscopic Assembly Events in Amyloid Formation Using Coarse Grained Simulations

Noah S. Bieler , Tuomas P. J. Knowles , Daan Frenkel , Robert Vácha
PLoS Computational Biology 8 ( 10) e1002692

51
2012
Charges at Aqueous Interfaces: Development of Computational Approaches in Direct Contact with Experiment

Robert Vácha , Frank Uhlig , Pavel Jungwirth
Advances in Chemical Physics 69 -96

1
2014
Hydronium and hydroxide at the interface between water and hydrophobic media

Robert Vácha , Dominik Horinek , Max L. Berkowitz , Pavel Jungwirth
Physical Chemistry Chemical Physics 10 ( 32) 4975 -4980

58
2008