On the nonidentifiability of migration time estimates in isolation with migration models

VITOR C. SOUSA , AUDE GRELAUD , JODY HEY
Molecular Ecology 20 ( 19) 3956 -3962

40
2011
SPAms: A user-friendly software to simulate population genetics data under complex demographic models

B. PARREIRA , M. TRUSSART , V. SOUSA , R. HUDSON
Molecular Ecology Resources 9 ( 3) 749 -753

7
2009
Investigating sex-biased migration during the Neolithic transition in Europe, using an explicit spatial simulation framework

Rita Rasteiro , Pierre-Antoine Bouttier , Vítor C. Sousa , Lounès Chikhi
Proceedings of The Royal Society B: Biological Sciences 279 ( 1737) 2409 -2416

29
2012
Adaptation and convergence in circadian-related genes in Iberian freshwater fish.

Maria M Coelho , Tiago F Jesus , Vitor C Sousa , João M Moreno
BMC Ecology and Evolution 21 ( 1) 38 -38

1
2021
Rapid host-plant adaptation in the herbivorous spider mite Tetranychus urticae occurs at low cost

Vitor C Sousa , Flore Zélé , Leonor R Rodrigues , Diogo P Godinho
Current opinion in insect science 36 82 -89

9
2019
The Evolutionary History of Nebraska Deer Mice: Local Adaptation in the Face of Strong Gene Flow

Susanne P Pfeifer , Stefan Laurent , Vitor C Sousa , Catherine R Linnen
Molecular Biology and Evolution 35 ( 4) 792 -806

41
2018
Phylogeny Estimation by Integration over Isolation with Migration Models.

Jody Hey , Yujin Chung , Arun Sethuraman , Joseph Lachance
Molecular Biology and Evolution 35 ( 11) 2805 -2818

43
2018
Whole-genome analysis of multiple wood ant population pairs supports similar speciation histories, but different degrees of gene flow, across their European ranges

Beatriz Portinha , Amaury Avril , Christian Bernasconi , Heikki Helanterä
Molecular Ecology 31 ( 12) 3416 -3431

8
2022
fastsimcoal2: demographic inference under complex evolutionary scenarios

Laurent Excoffier , Nina Marchi , David Alexander Marques , Remi Matthey-Doret
Bioinformatics 37 ( 24) 4882 -4885

62
2021
Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers

Martin Sikora , Andaine Seguin-Orlando , Vitor C Sousa , Anders Albrechtsen
Yearbook of Paediatric Endocrinology 15

270
2018
fastsimcoal ver 2.8 fsc28

Laurent Excoffier , Nina Marchi , Vitor C Sousa

1
2021
poolHelper: An R package to help in designing Pool‐Seq studies

João Carvalho , Rui Faria , Roger K Butlin , Vitor C Sousa
Methods in Ecology and Evolution 14 ( 9) 2300 -2307

2023
Sex in the kitchen: non-additive effects of competition for food and reproductive interference on coexistence outcomes between sibling species

Miguel A Cruz , Oscar Godoy , Inês Fragata , Vitor C Sousa
bioRxiv 2023.11. 09.566372 -2023.11. 09.566372

2023
A genomic history of Aboriginal Australia

Anna-Sapfo Malaspinas , Michael C Westaway , Craig Muller , Vitor C Sousa
Nature 538 ( 7624) 207 -214

225
2016
Faster‐haplodiploid evolution under divergence‐with‐gene‐flow: Simulations and empirical data from pine‐feeding hymenopterans

Emily E Bendall , Robin K Bagley , Vitor C Sousa , Catherine R Linnen
Molecular Ecology 31 ( 8) 2348 -2366

9
2022
6
2022
Chimpanzee genomic diversity reveals ancient admixture with bonobos

Marc De Manuel , Martin Kuhlwilm , Peter Frandsen , Vitor C Sousa
Science 354 ( 6311) 477 -481

141
2016
Demographic modelling with whole-genome data reveals parallel origin of similar Pundamilia cichlid species after hybridization.

Joana I Meier , Vitor C Sousa , David A Marques , Oliver M Selz
Molecular Ecology 26 ( 1) 123 -141

109
2017
Admixture between old lineages facilitated contemporary ecological speciation in Lake Constance stickleback.

David A Marques , Kay Lucek , Vitor C Sousa , Laurent Excoffier
Nature Communications 10 ( 1) 4240 -4240

46
2019