A Multi-scale Computational Platform to Mechanistically Assess the Effect of Genetic Variation on Drug Responses in Human Erythrocyte Metabolism.

Nathan Mih , Elizabeth Brunk , Aarash Bordbar , Bernhard O. Palsson
PLOS Computational Biology 12 ( 7)

11
2016
Functional Characterization of Alternate Optimal Solutions of Escherichia coli's Transcriptional and Translational Machinery

Ines Thiele , Ronan M.T. Fleming , Aarash Bordbar , Jan Schellenberger
Biophysical Journal 98 ( 10) 2072 -2081

44
2010
Biomarkers defining the metabolic age of red blood cells during cold storage

Giuseppe Paglia , Angelo D’Alessandro , Óttar Rolfsson , Ólafur E. Sigurjónsson
Blood 128 ( 13)

66
2016
Constraint-based models predict metabolic and associated cellular functions

Aarash Bordbar , Jonathan M. Monk , Zachary A. King , Bernhard O. Palsson
Nature Reviews Genetics 15 ( 2) 107 -120

823
2014
Blood donor exposome and impact of common drugs on red blood cell metabolism

Travis Nemkov , Davide Stefanoni , Aarash Bordbar , Aaron Issaian
JCI insight 6 ( 3)

29
2021
Identified metabolic signature for assessing red blood cell unit quality is associated with endothelial damage markers and clinical outcomes.

Aarash Bordbar , Pär I. Johansson , Giuseppe Paglia , Scott J. Harrison
Transfusion 56 ( 4) 852 -862

68
2016
Citrate metabolism in red blood cells stored in additive solution-3.

Angelo D'Alessandro , Travis Nemkov , Tatsuro Yoshida , Aarash Bordbar
Transfusion 57 ( 2) 325 -336

59
2017
Metabolic fate of adenine in red blood cells during storage in SAGM solution.

Giuseppe Paglia , Ólafur E. Sigurjónsson , Aarash Bordbar , Óttar Rolfsson
Transfusion 56 ( 10) 2538 -2547

24
2016
Mannose and fructose metabolism in red blood cells during cold storage in SAGM

Óttar Rolfsson , Freyr Johannsson , Manuela Magnusdottir , Giuseppe Paglia
Transfusion 57 ( 11) 2665 -2676

17
2017
Development and evaluation of a transfusion medicine genome wide genotyping array.

Yuelong Guo , Michael P Busch , Mark Seielstad , Stacy Endres‐Dighe
Transfusion 59 ( 1) 101 -111

13
2019
Quantitative time-course metabolomics in human red blood cells reveal the temperature dependence of human metabolic networks

James T. Yurkovich , Daniel C. Zielinski , Laurence Yang , Giuseppe Paglia
Journal of Biological Chemistry 292 ( 48) 19556 -19564

42
2017
Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome

Nathan E Lewis , Xin Liu , Yuxiang Li , Harish Nagarajan
Nature Biotechnology 31 ( 8) 759 -765

408
2013
Minimal metabolic pathway structure is consistent with associated biomolecular interactions

Aarash Bordbar , Harish Nagarajan , Nathan E Lewis , Haythem Latif
Molecular Systems Biology 10 ( 7) 737 -737

49
2014
Do genome-scale models need exact solvers or clearer standards?

Ali Ebrahim , Eivind Almaas , Eugen Bauer , Aarash Bordbar
Molecular Systems Biology 11 ( 10) 831 -831

44
2015
Pharmacogenomic and clinical data link non-pharmacokinetic metabolic dysregulation to drug side effect pathogenesis

Daniel C. Zielinski , Fabian V. Filipp , Aarash Bordbar , Kasper Jensen
Nature Communications 6 ( 1) 7101 -7101

35
2015
Large-scale in silico modeling of metabolic interactions between cell types in the human brain

Nathan E Lewis , Gunnar Schramm , Aarash Bordbar , Jan Schellenberger
Nature Biotechnology 28 ( 12) 1279 -1285

214
2010
Modeling Mycobacterium tuberculosis H37Rv In Silico

Neema Jamshidi , Aarash Bordbar , Bernhard Palsson
Systems Biology of Tuberculosis 1 -19

2013
Systems biology as an emerging paradigm in transfusion medicine.

James T. Yurkovich , Aarash Bordbar , Ólafur E. Sigurjónsson , Bernhard O. Palsson
BMC Systems Biology 12 ( 1) 31

7
2018
Systems biology analysis of drivers underlying hallmarks of cancer cell metabolism.

Daniel C. Zielinski , Neema Jamshidi , Austin J. Corbett , Aarash Bordbar
Scientific Reports 7 ( 1) 41241 -41241

52
2017