引用次数
引用: 4,628
H-指数: 38
I10-指数 : 85
出版物: 118
The International Virus Bioinformatics Meeting 2023
Franziska Hufsky , Ana B Abecasis , Artem Babaian , Sebastian Beck
Viruses 15 ( 10) 2031 -2031
2023
An environment for sustainable research software in Germany and beyond: current state, open challenges, and call for action.
Hartwig Anzt , Felix Bach , Stephan Druskat , Frank Löffler
F1000Research 9 295 -295
2
2020
Where did you come from, where did you go: Refining metagenomic analysis tools for horizontal gene transfer characterisation.
Enrico Seiler , Kathrin Trappe , Bernhard Y. Renard
PLOS Computational Biology 15 ( 7)
3
2019
When less can yield more - Computational preprocessing of MS/MS spectra for peptide identification.
Bernhard Y. Renard , Marc Kirchner , Flavio Monigatti , Alexander R. Ivanov
Proteomics 9 ( 21) 4978 -4984
59
2009
The Proteome of the Isolated Chlamydia trachomatis Containing Vacuole Reveals a Complex Trafficking Platform Enriched for Retromer Components
Lukas Aeberhard , Sebastian Banhart , Martina Fischer , Nico Jehmlich
PLOS Pathogens 11 ( 6) e1004883
52
2015
HiTaC: Hierarchical Taxonomic Classification of Fungal ITS Sequences
Fábio M. Miranda , Vasco A. C. Azevedo , Bernhard Y. Renard , Vitor C. Piro
bioRxiv
2020
Purple: A Computational Workflow for Strategic Selection of Peptides for Viral Diagnostics Using MS-Based Targeted Proteomics.
Johanna Lechner , Felix Hartkopf , Pauline Hiort , Andreas Nitsche
Viruses 11 ( 6) 536
5
2019
Concise Representation of Mass Spectrometry Images by Probabilistic Latent Semantic Analysis
Michael Hanselmann , Marc Kirchner , Bernhard Y. Renard , Erika R. Amstalden
Analytical Chemistry 80 ( 24) 9649 -9658
124
2008
Peptide-to-Protein Summarization: An Important Step for Accurate Quantification in Label-Based Proteomics
Martina Fischer , Thilo Muth , Bernhard Y. Renard
Methods of Molecular Biology 1977 159 -180
2019
Recursive feature elimination in random forest classification supports nanomaterial grouping
Aileen Bahl , Bryan Hellack , Mihaela Balas , Anca Dinischiotu
NanoImpact 15 100179
55
2019
Confidence-based Somatic Mutation Evaluation and Prioritization
Martin Löwer , Bernhard Y. Renard , Jos de Graaf , Meike Wagner
PLoS Computational Biology 8 ( 9) e1002714
30
2012
Computational protein profile similarity screening for quantitative mass spectrometry experiments
Marc Kirchner , Bernhard Y. Renard , Ullrich Köthe , Darryl J. Pappin
Bioinformatics 26 ( 1) 77 -83
12
2010
RAMBO-K: Rapid and Sensitive Removal of Background Sequences from Next Generation Sequencing Data
Simon H. Tausch , Bernhard Y. Renard , Andreas Nitsche , Piotr Wojciech Dabrowski
PLOS ONE 10 ( 9) e0137896
15
2015
Parasitic Nematodes Exert Antimicrobial Activity and Benefit From Microbiota-Driven Support for Host Immune Regulation
Sebastian Rausch , Ankur Midha , Matthias Kuhring , Nicole Affinass
Frontiers in Immunology 9 2282 -2282
48
2018
Metagenomic abundance estimation and diagnostic testing on species level
Martin S. Lindner , Bernhard Y. Renard
Nucleic Acids Research 41 ( 1)
53
2013
Metagenomic Profiling of Known and Unknown Microbes with MicrobeGPS
Martin S. Lindner , Bernhard Y. Renard
PLOS ONE 10 ( 2) e0117711
24
2015
Estimating the computational limits of detection of microbial non-model organisms.
Mathias Kuhring , Bernhard Y. Renard
Proteomics 15 ( 20) 3580 -3584
8
2015
A Potential Golden Age to Come-Current Tools, Recent Use Cases, and Future Avenues for De Novo Sequencing in Proteomics.
Thilo Muth , Felix Hartkopf , Marc Vaudel , Bernhard Y. Renard
Proteomics 18 ( 18) 1700150
47
2018
MSProGene: integrative proteogenomics beyond six-frames and single nucleotide polymorphisms.
Franziska Zickmann , Bernhard Y. Renard
Bioinformatics 31 ( 12) 106 -115
39
2015
iPQF: A new peptide-to-protein summarization method using peptide spectra characteristics to improve protein quantification
Martina Fischer , Bernhard Y. Renard
Bioinformatics 32 ( 7) 1040 -1047
7
2016