David Dylus
机构: Senior Scientist, Systems Biology, Roche
每年引用次数
引用次数
引用: 1,009
H-指数: 12
I10-指数 : 14
出版物: 28
Taxon sampling unequally affects individual nodes in a phylogenetic tree: consequences for model gene tree construction in SwissTree
Brigitte Boeckmann , David Dylus , Sebastien Moretti , Adrian Altenhoff
bioRxiv 181966
4
2017
Phylo.io: Interactive Viewing and Comparison of Large Phylogenetic Trees on the Web
Oscar Robinson , David Dylus , Christophe Dessimoz
Molecular Biology and Evolution 33 ( 8) 2163 -2166
177
2016
Corrigendum: OMA standalone: orthology inference among public and custom genomes and transcriptomes
Adrian M. Altenhoff , Jeremy Levy , Magdalena Zarowiecki , Bartłomiej Tomiczek
Genome Research 30 ( 6)
2020
Clinical bioinformatics for microbial genomics and metagenomics: an ESCMID Postgraduate Technical Workshop.
Gilbert Greub , Patricia M Palagi , David Dylus , Adrian Egli
Microbes and Infection 22 ( 10) 626 -634
2020
How to build phylogenetic species trees with OMA
David Dylus , Yannis Nevers , Adrian M. Altenhoff , Antoine Gürtler
F1000Research 9 511
3
2020
The phylogenetic range of bacterial and viral pathogens of vertebrates
Liam P. Shaw , Alethea D. Wang , David Dylus , Magda Meier
Molecular Ecology 29 ( 17) 3361 -3379
21
2020
The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces.
Adrian M Altenhoff , Natasha M Glover , Clément-Marie Train , Klara Kaleb
Nucleic Acids Research 46
160
2018
Bifurcation search via feedback loop breaking in biochemical signaling pathways with time delay
Steffen Waldherr , David Dylus , Frank Allgöwer
Asian Journal of Control 13 ( 5) 691 -700
5
2011
RecPhyloXML: a format for reconciled gene trees.
Wandrille Duchemin , Guillaume Gence , Anne-Muriel Arigon Chifolleau , Lars Arvestad
Bioinformatics 34 ( 21) 3646 -3652
8
2018
New Genome Assembly of the Barn Owl ( Tyto Alba alba)
Anne‐Lyse Ducrest , Samuel Neuenschwander , Emanuel Schmid‐Siegert , Marco Pagni
Ecology and Evolution 10 ( 5) 2284 -2298
3
2020
NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test.
David Dylus , Trestan Pillonel , Onya Opota , Daniel Wüthrich
Frontiers in Microbiology 11 591093
9
2020
The brittle star genome illuminates the genetic basis of animal appendage regeneration
Elise Parey , Olga Ortega-Martinez , Jérôme Delroisse , Laura Piovani
bioRxiv 2023.10. 30.564762 -2023.10. 30.564762
1
2023
Inference of phylogenetic trees directly from raw sequencing reads using Read2Tree
David Dylus , Adrian Altenhoff , Sina Majidian , Fritz J Sedlazeck
Nature Biotechnology 42 ( 1) 139 -147
16
2024
Read2Tree: scalable and accurate phylogenetic trees from raw reads (preprint)
David Dylus , Adrian M Altenhoff , Sina Majidian , Fritz J Sedlazeck
2022
Read2Tree: scalable and accurate phylogenetic trees from raw reads
David Dylus , Adrian Altenhoff , Sina Majidian , Fritz J Sedlazeck
bioRxiv
2022
How to build phylogenetic species trees with OMA [version 2; peer review: 2 approved with reservations]
David Dylus , Yannis Nevers , Adrian M Altenhoff , Antoine Gürtler
F1000Research 9
2022
OMA standalone: orthology inference among public and custom genomes and transcriptomes (vol 29, pg 1152, 2019)
Adrian M Altenhoff , Jeremy Levy , Magdalena Zarowiecki , Bartlomiej Tomiczek
GENOME RESEARCH 30 ( 6) 938 -938
2020
Corrigendum: Human auditory ossicles as an alternative optimal source of ancient DNA
Adrian M Altenhoff , Jeremy Levy , Magdalena Zarowiecki , Bartłomiej Tomiczek
Genome Research 30 427 -436
2020
Human Th17-and IgG3-associated autoimmunity induced by a translocating gut pathobiont
Konrad Gronke , Mytien Nguyen , Noemi Santamaria de Souza , Julia Schumacher
bioRxiv 2023.06. 29.546430 -2023.06. 29.546430
1
2023
OMA standalone: orthology inference among public and custom genomes and transcriptomes
Adrian M Altenhoff , Jeremy Levy , Magdalena Zarowiecki , Bartłomiej Tomiczek
bioRxiv 397752
81
2018