Sylites: Multipurpose markers for the visualization of inhibitory synapses

Heinze K , Villmann C , Avraham O , Furman-Schueler O
bioRxiv

2021
Structure-based prediction of binding peptides to MHC class I molecules: application to a broad range of MHC alleles.

Ora Schueler‐Furman , Yael Altuvia , Alessandro Sette , Hanah Margalit
Protein Science 9 ( 9) 1838 -1846

186
2000
FlexPepDock lessons from CAPRI peptide–protein rounds and suggested new criteria for assessment of model quality and utility

Orly Marcu , Emma‐Joy Dodson , Nawsad Alam , Michal Sperber
Proteins 85 ( 3) 445 -462

13
2017
Modeling beta-sheet peptide-protein interactions: Rosetta FlexPepDock in CAPRI rounds 38-45.

Alisa Khramushin , Orly Marcu , Nawsad Alam , Orly Shimony
Proteins 88 ( 8) 1037 -1049

4
2020
ClusPro in rounds 38 to 45 of CAPRI: Toward combining template-based methods with free docking.

Dzmitry Padhorny , Kathryn A. Porter , Mikhail Ignatov , Andrey Alekseenko
Proteins 88 ( 8) 1082 -1090

2
2020
Front Cover: Targeting an Interaction Between Two Disordered Domains by Using a Designed Peptide (Chem. Eur. J. 45/2020)

Guy Mayer , Zohar Shpilt , Shachar Bressler , Orly Marcu
Chemistry: A European Journal 26 ( 45) 10152 -10152

2020
Targeting an Interaction Between Two Disordered Domains by Using a Designed Peptide

Guy Mayer , Zohar Shpilt , Shachar Bressler , Orly Marcu
Chemistry – A European Journal 26 ( 45) 10240 -10249

2020
Phosphorylation of the WWOX Protein Regulates Its Interaction with p73.

Noa Lahav , Shahar Rotem‐Bamberger , Jamal Fahoum , Emma‐Joy Dodson
ChemBioChem 21 ( 13) 1843 -1851

2020
Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study

Hugo Schweke , Qifang Xu , Gerardo Tauriello , Lorenzo Pantolini
Proteomics 23 ( 17) 2200323 -2200323

7
2023
Structural study of UFL1‐UFC1 interaction uncovers the role of UFL1 N‐terminal helix in ufmylation

Sayanika Banerjee , Julia K Varga , Manoj Kumar , Guy Zoltsman
EMBO reports 24 ( 12) e56920 -e56920

4
2023
A versatile synthetic affinity probe reveals inhibitory synapse ultrastructure and brain connectivity

Vladimir Khayenko , Clemens Schulte , Sara L Reis , Orly Avraham
Angewandte Chemie International Edition 61 ( 30) e202202078 -e202202078

6
2022
Eine vielseitige synthetische Affinitätssonde zur hochaufgelösten Visualisierung hemmender Synapsen und neuronaler Netzwerke

Vladimir Khayenko , Clemens Schulte , Sara L Reis , Orly Avraham
Angewandte Chemie 134 ( 30) e202202078 -e202202078

1
2022
Who binds better? Let Alphafold2 decide!

Julia K Varga , Ora Schueler‐Furman
Angewandte Chemie International Edition 62 ( 28) e202303526 -e202303526

2023
Cover Picture: A Versatile Synthetic Affinity Probe Reveals Inhibitory Synapse Ultrastructure and Brain Connectivity (Angew. Chem. Int. Ed. 30/2022)

Vladimir Khayenko , Clemens Schulte , Sara L Reis , Orly Avraham
Angewandte Chemie International Edition 61 ( 30) e202207941 -e202207941

2022
Titelbild: Eine vielseitige synthetische Affinitätssonde zur hochaufgelösten Visualisierung hemmender Synapsen und neuronaler Netzwerke (Angew. Chem. 30/2022)

Vladimir Khayenko , Clemens Schulte , Sara L Reis , Orly Avraham
Angewandte Chemie 134 ( 30) e202207941 -e202207941

2022
Extending RosettaDock with water, sugar, and pH for prediction of complex structures and affinities for CAPRI rounds 20–27

Krishna Praneeth Kilambi , Michael S Pacella , Jianqing Xu , Jason W Labonte
Proteins 81 ( 12) 2201 -2209

25
2013
Volume 331, Number

E Alani , M Baaden , D Baker , C Briones

The versatile roles of peptide-mediated interactions detected by modeling and experiment

O Schueler-Furman , N Alam , O Marcu , E Dodson
FEBS JOURNAL 283 23 -23

2016