An analytically tractable model for competitive speciation.

Pleuni S. Pennings , Michael Kopp , Géza Meszéna , Ulf Dieckmann
The American Naturalist 171 ( 1)

72
2008
Standing Genetic Variation and the Evolution of Drug Resistance in HIV

Pleuni Simone Pennings
PLoS Computational Biology 8 ( 6) e1002527

78
2012
Sequence type diversity amongst antibiotic-resistant bacterial strains is lower than amongst antibiotic-susceptible strains

Anjani Pradhananga , Lorena Benitez-Rivera , Candace Clark , Kaho Tisthammer
bioRxiv 2022.11. 23.517742 -2022.11. 23.517742

1
2022
Oh sister, where art thou? Spatial population structure and the evolution of an altruistic defence trait

T. Pamminger , S. Foitzik , D. Metzler , P. S. Pennings
Journal of Evolutionary Biology 27 ( 11) 2443 -2456

15
2014
HIV-1 Transmission Networks in a Small World

P. S. Pennings , S. P. Holmes , R. W. Shafer
The Journal of Infectious Diseases 209 ( 2) 180 -182

5
2014
12
2012
Wolbachia bacteria effects after experimental interspecific transfers in terrestrial isopods.

T. Rigaud , P.S. Pennings , P. Juchault
Journal of Invertebrate Pathology 77 ( 4) 251 -257

47
2001
Genetic diversity, population structure and sex-biased dispersal in three co-evolving species.

S. FOITZIK , S. BAUER , S. LAURENT , P. S. PENNINGS
Journal of Evolutionary Biology 22 ( 12) 2470 -2480

11
2009
Similar evolutionary potentials in an obligate ant parasite and its two host species.

P. S. PENNINGS , A. ACHENBACH , S. FOITZIK
Journal of Evolutionary Biology 24 ( 4) 871 -886

28
2011
The clarifying role of time series data in the population genetics of HIV.

Dmitri A. Petrov , Alison F. Feder , Pleuni S. Pennings
PLOS Genetics 17 ( 1)

2
2021
Comparative Analysis of Within-Host Mutation Patterns and Diversity of Hepatitis C Virus Subtypes 1a, 1b, and 3a

Pleuni S. Pennings , Jeffrey B. Joy , Kaho H. Tisthammer , Weiyan Dong
Viruses 13 ( 3) 511

2021
Collectively Improving Our Teaching: Attempting Biology Department–wide Professional Development in Scientific Teaching

Melinda T Owens , Gloriana Trujillo , Shannon B Seidel , Colin D Harrison
CBE- Life Sciences Education 17 ( 1)

50
2018
Investigating Instructor Talk in Novel Contexts: Widespread Use, Unexpected Categories, and an Emergent Sampling Strategy.

Colin D Harrison , Tiffy A Nguyen , Shannon B Seidel , Alycia M Escobedo
CBE- Life Sciences Education 18 ( 3)

10
2019
HIV Drug Resistance: Problems and Perspectives.

Pleuni S. Pennings
Infectious Disease Reports 5 5

70
2013
Polygenic adaptation: From sweeps to subtle frequency shifts

Ilse Höllinger , Pleuni S. Pennings , Joachim Hermisson
PLOS Genetics 15 ( 3)

41
2019
Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multidrug resistance

Stefany Moreno-Gamez , Alison L. Hill , Daniel I. S. Rosenbloom , Dmitri A. Petrov
Proceedings of the National Academy of Sciences of the United States of America 112 ( 22) 201424184

93
2015
Loss and recovery of genetic diversity in adapting populations of HIV

Pleuni S. Pennings , Sergey Kryazhimskiy , John Wakeley
PLOS Genetics 10 ( 1)

115
2014
Soft Selective Sweeps in Evolutionary Rescue.

Benjamin A. Wilson , Pleuni S. Pennings , Dmitri A. Petrov
Genetics 205 ( 4) 1573 -1586

27
2017
Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV

Kristof Theys , Alison F. Feder , Maoz Gelbart , Marion Hartl
PLOS Genetics 14 ( 6)

28
2018