Cyanobacteria evolution: Insight from the fossil record.
Catherine F Demoulin , Yannick J Lara , Luc Cornet , Camille François
Free Radical Biology and Medicine 140 206 -223
100
2019
Patrocles: a database of polymorphic miRNA-mediated gene regulation in vertebrates
Samuel Hiard , Carole Charlier , Wouter Coppieters , Michel Georges
Nucleic Acids Research 38 640 -651
129
2010
Metagenomic assembly of new (sub)polar Cyanobacteria and their associated microbiome from non-axenic cultures.
Luc Cornet , Amandine R. Bertrand , Marc Hanikenne , Emmanuelle J. Javaux
Microbial genomics 4 ( 9)
9
2018
Regulation of the alternative oxidase Aox1 gene in Chlamydomonas reinhardtii. Role of the nitrogen source on the expression of a reporter gene under the control of the Aox1 promoter
Denis Baurain , Monique Dinant , Nadine Coosemans , René F. Matagne
Plant Physiology 131 ( 3) 1418 -1430
70
2003
Assessment of the Potential Role of Streptomyces in Cave Moonmilk Formation
Marta Maciejewska , Delphine Adam , Aymeric Naômé , Loïc Martinet
Frontiers in Microbiology 8 1181
27
2017
A Phenotypic and Genotypic Analysis of the Antimicrobial Potential of Cultivable Streptomyces Isolated from Cave Moonmilk Deposits.
Marta Maciejewska , Delphine Adam , Loïc Martinet , Aymeric Naômé
Frontiers in Microbiology 7 1455 -1455
32
2016
A constrained SSU-rRNA phylogeny reveals the unsequenced diversity of photosynthetic Cyanobacteria (Oxyphotobacteria).
Luc Cornet , Annick Wilmotte , Emmanuelle J. Javaux , Denis Baurain
BMC Research Notes 11 ( 1) 435 -435
6
2018
Consensus assessment of the contamination level of publicly available cyanobacterial genomes
Luc Cornet , Loïc Meunier , Mick Van Vlierberghe , Raphaël R. Léonard
bioRxiv 301788
46
2018
Impact of Missing Data on Phylogenies Inferred from Empirical Phylogenomic Data Sets
Béatrice Roure , Denis Baurain , Hervé Philippe
Molecular Biology and Evolution 30 ( 1) 197 -214
236
2013
Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough
Hervé Philippe , Henner Brinkmann , Dennis V. Lavrov , D. Timothy J. Littlewood
PLoS Biology 9 ( 3) e1000602
996
2011
Palantir: a springboard for the analysis of secondary metabolite gene clusters in large-scale genome mining projects.
Loïc Meunier , Pierre Tocquin , Luc Cornet , Damien Sirjacobs
Bioinformatics 36 ( 15) 4345 -4347
1
2020
Rooting the tree of life: the phylogenetic jury is still out.
Richard Gouy , Denis Baurain , Hervé Philippe
Philosophical Transactions of the Royal Society B 370 ( 1678) 20140329 -20140329
48
2015
Characterization of two genes encoding the mitochondrial alternative oxidase in Chlamydomonas reinhardtii.
Monique Dinant , Denis Baurain , Nadine Coosemans , Bernard Joris
Current Genetics 39 ( 2) 101 -108
53
2001
Lack of Resolution in the Animal Phylogeny: Closely Spaced Cladogeneses or Undetected Systematic Errors?
Denis Baurain , Henner Brinkmann , Hervé Philippe
Molecular Biology and Evolution 24 ( 1) 6 -9
127
2007
Arthrospira ('Spirulina') strains from four continents are resolved into only two clusters, based on amplified ribosomal DNA restriction analysis of the internally transcribed spacer
Patsy Scheldeman , Denis Baurain , Rachel Bouhy , Mark Scott
Fems Microbiology Letters 172 ( 2) 213 -222
71
1999
Phylotranscriptomic consolidation of the jawed vertebrate timetree.
Iker Irisarri , Denis Baurain , Henner Brinkmann , Frédéric Delsuc
Nature Ecology and Evolution 1 ( 9) 1370 -1378
206
2017
Variants modulating the expression of a chromosome domain encompassing PLAG1 influence bovine stature
Latifa Karim , Haruko Takeda , Li Lin , Tom Druet
Nature Genetics 43 ( 5) 405 -413
218
2011
A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals
Paul Simion , Hervé Philippe , Denis Baurain , Muriel Jager
Current Biology 27 ( 7) 958 -967
285
2017
Chromera velia, endosymbioses and the rhodoplex hypothesis--plastid evolution in cryptophytes, alveolates, stramenopiles, and haptophytes (CASH lineages).
Jörn Petersen , Ann-Kathrin Ludewig , Victoria Michael , Boyke Bunk
Genome Biology and Evolution 6 ( 3) 666 -684
79
2014
Pitfalls in supermatrix phylogenomics
Hervé Philippe , Damien M. de Vienne , Vincent Ranwez , Béatrice Roure
European journal of taxonomy 283 ( 283) 1 -25
68
2017
Hervé Philippe Luc Cornet Javaux Emmanuelle Marc Hanikenne Frédéric Delsuc Pierre Cardol Claire Remacle Gert Wörheide Carole Charlier Beatrice Roure Dennis V. Lavrov Sébastien Rigali Diego Gonzalez Halphen H. Dail Laughinghouse IV DTJ Littlewood Samuel Hiard Tom Druet B. Franz Lang Andrew Roger Stephen R. Davis