Imputation of Truncated p-Values For Meta-Analysis Methods and Its Genomic Application.
Jeffrey S. Mogil , William R. Lariviere , George C. Tseng , Etienne Sibille
The Annals of Applied Statistics 8 ( 4) 2150 -2174
3
2014
Meta-analytic framework for sparse K -means to identify disease subtypes in multiple transcriptomic studies.
Zhiguang Huo , Ying Ding , Silvia Liu , Steffi Oesterreich
Journal of the American Statistical Association 111 ( 513) 27 -42
24
2016
General Library-Based Monte Carlo Technique Enables Equilibrium Sampling of Semi-atomistic Protein Models
Artem B. Mamonov , Divesh Bhatt , Derek J. Cashman , Ying Ding
Journal of Physical Chemistry B 113 ( 31) 10891 -10904
24
2009
Sex chromosome complement regulates expression of mood-related genes
Marianne L Seney , Kokomma I Ekong , Ying Ding , George C Tseng
Biology of Sex Differences 4 ( 1) 20 -20
42
2013
High Fidelity Copy Number Analysis of Formalin-Fixed and Paraffin-Embedded Tissues Using Affymetrix Cytoscan HD Chip
Yan P. Yu , Amantha Michalopoulos , Ying Ding , George Tseng
PLoS ONE 9 ( 4) e92820
11
2014
Multi-omics profiling of younger Asian breast cancers reveals distinctive molecular signatures
Zhengyan Kan , Ying Ding , Jinho Kim , Hae Hyun Jung
Nature Communications 9 ( 1) 1725 -1725
109
2018
Gene deletions and amplifications in human hepatocellular carcinomas: correlation with hepatocyte growth regulation.
Michael A. Nalesnik , George Tseng , Ying Ding , Guo-Sheng Xiang
American Journal of Pathology 180 ( 4) 1495 -1508
54
2012
Genome-Wide Methylation Analysis of Prostate Tissues Reveals Global Methylation Patterns of Prostate Cancer
Jian-Hua Luo , Ying Ding , Rui Chen , George Michalopoulos
American Journal of Pathology 182 ( 6) 2028 -2036
35
2013
Oncogenic Activity of miR-650 in Prostate Cancer Is Mediated by Suppression of CSR1 Expression.
Ze-Hua Zuo , Yan P. Yu , Ying Ding , Silvia Liu
American Journal of Pathology 185 ( 7) 1991 -1999
22
2015
Tunable, mixed-resolution modeling using library-based Monte Carlo and graphics processing units.
Artem B. Mamonov , Steven Lettieri , Ying Ding , Jessica L. Sarver
Journal of Chemical Theory and Computation 8 ( 8) 2921 -2929
11
2012
Predisposition to treatment response in major depressive episode: A peripheral blood gene coexpression network analysis
Raoul Belzeaux , Chien-Wei Lin , Ying Ding , Aurélie Bergon
Journal of Psychiatric Research 81 119 -126
18
2016
Abstract LB-325: Multi-omics and immuno-oncology profiling of an Asian breast cancer cohort enriched in young and premenopausal patients
Yeon Hee Park , Ying Ding , Soonweng Cho , Soo-Hyeon Lee
Cancer Research 76
2016
Comprehensive evaluation of fusion transcript detection algorithms and a meta-caller to combine top performing methods in paired-end RNA-seq data
Silvia Liu , Wei-Hsiang Tsai , Ying Ding , Rui Chen
Nucleic Acids Research 44 ( 5)
96
2016
Bias correction for selecting the minimal-error classifier from many machine learning models
Ying Ding , Shaowu Tang , Serena G. Liao , Jia Jia
Bioinformatics 30 ( 22) 3152 -3158
19
2014
Meta-analytic framework for liquid association.
Lin Wang , Silvia Liu , Ying Ding , Shin-sheng Yuan
Bioinformatics 33 ( 14) 2140 -2147
8
2017
An R package suite for microarray meta-analysis in quality control, differentially expressed gene analysis and pathway enrichment detection
Xingbin Wang , Dongwan D. Kang , Kui Shen , Chi Song
Bioinformatics 28 ( 19) 2534 -2536
202
2012
Testing the Predictive Value of Peripheral Gene Expression for Nonremission Following Citalopram Treatment for Major Depression
Jean-Philippe Guilloux , Sabrina Bassi , Ying Ding , Chris Walsh
Neuropsychopharmacology 40 ( 3) 701 -710
35
2015
Molecular and Genetic Characterization of Depression: Overlap with other Psychiatric Disorders and Aging.
Ying Ding , Lun-Ching Chang , Xingbin Wang , Jean-Philippe Guilloux
Molecular Neuropsychiatry 1 ( 1) 1 -12
46
2015
Efficient Equilibrium Sampling of All-Atom Peptides using Library-Based Monte Carlo
Ying Ding , Artem B. Mamonov , Daniel M. Zuckerman
Biophysical Journal 98 ( 3) 571
1
2010
Abstract A2-33: Molecular profiling of patient-derived xenograft models across cancers
Zhengyan Kan , Edward Rosfjord , James Hardwick , Ying Ding
Cancer Research 75
2015