Website on Protein Interaction and Protein Structure Related Work

Shoudan Liang , Manoj Samanta , Bryan Biegel

2003
Novel features in the I-V characteristics in junctions between d-wave superconductors

Manoj Samanta , Supriyo Datta
APS March Meeting Abstracts

1997
The Ectocarpus genome and the independent evolution of multicellularity in brown algae

J. Mark Cock , Lieven Sterck , Pierre Rouzé , Delphine Scornet
Nature 465 ( 7298) 617 -621

668
2010
Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping

Thomas E. Royce , Joel S. Rozowsky , Paul Bertone , Manoj Samanta
Trends in Genetics 21 ( 8) 466 -475

97
2005
The Ectocarpus genome and brown algal genomics: the Ectocarpus Genome Consortium

J. Mark Cock , Lieven Sterck , Sophia Ahmed , Andrew E. Allen
Advances in Botanical Research 64 141 -184

11
2012
Analysis of Antisense Expression by Whole Genome Tiling Microarrays and siRNAs Suggests Mis-Annotation of Arabidopsis Orphan Protein-Coding Genes

Casey R. Richardson , Qing-Jun Luo , Viktoria Gontcharova , Ying-Wen Jiang
PLoS ONE 5 ( 5) e10710

6
2010
Sequence Analysis and Comparative Study of the Protein Subunits of Archaeal RNase P

Manoj Samanta , Stella Lai , Charles Daniels , Venkat Gopalan
Biomolecules 6 ( 2) 22

8
2016
444 Shaping time: chromatin structure and the DNA replication programme

Anne D Donaldson , Robert A Martienssen , Mikel Zaratiegui , Derek B Goto
Genetics 21 ( 8) 421 -476

2005
Global Identification of Human Transcribed Sequences with Genome Tiling Arrays

Paul Bertone , Viktor Stolc , Thomas E Royce , Joel S Rozowsky
Science 306 ( 5705) 2242 -2246

1,277
2004
cWINNOWER algorithm for finding fuzzy dna motifs.

S. LIANG , M. P. SAMANTA , B. A. BIEGEL
Journal of Bioinformatics and Computational Biology 2 ( 1) 47 -60

33
2004
Electronic Transport in Organic Molecules

C. P. Kubiak , M. P. Samanta , J. I. Henderson , W. Tian
APS March Meeting Abstracts

1996
1996
Global identification of noncoding RNAs in Saccharomyces cerevisiae by modulating an essential RNA processing pathway

M. P. Samanta , W. Tongprasit , H. Sethi , C.-S. Chin
Proceedings of the National Academy of Sciences of the United States of America 103 ( 11) 4192 -4197

69
2006
Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays

V. Stolc , M. P. Samanta , W. Tongprasit , H. Sethi
Proceedings of the National Academy of Sciences of the United States of America 102 ( 12) 4453 -4458

140
2005
Genome-wide transcriptional analysis of flagellar regeneration in Chlamydomonas reinhardtii identifies orthologs of ciliary disease genes.

V. Stolc , M. P. Samanta , W. Tongprasit , W. F. Marshall
Proceedings of the National Academy of Sciences of the United States of America 102 ( 10) 3703 -3707

190
2005
Genomic basis for the convergent evolution of electric organs

J. R. Gallant , L. L. Traeger , J. D. Volkening , H. Moffett
Science 344 ( 6191) 1522 -1525

126
2014
Global snapshot of a protein interaction network—a percolation based approach

C.-S. Chin , M. P. Samanta
Bioinformatics 19 ( 18) 2413 -2419

35
2003
Predicting protein functions from redundancies in large-scale protein interaction networks

M. P. Samanta , S. Liang
Proceedings of the National Academy of Sciences of the United States of America 100 ( 22) 12579 -12583

266
2003
The transcriptome of the sea urchin embryo

M. P. Samanta , W. Tongprasit , S. Istrail , R. A. Cameron
Science 314 ( 5801) 960 -962

111
2006
The genome of the sea urchin Strongylocentrotus purpuratus.

Erica Sodergren , George M Weinstock , Eric H Davidson , R Andrew Cameron
Science 314 ( 5801) 941 -952

1,187
2006