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H. E. Gaub , M. A. Jobst , W. Ott , E. D. Durner
European Biophysics Journal

2017
Revealing binding conformations of protein receptor ligand systems and their nano-arrangement by AFM

H. E. Gaub , M. A. Jobst , W. Ott , E. D. Durner
European Biophysics Journal

2017
Molecular Tools for Advanced Single-Molecule Studies

Fabian Baumann , Magnus Sebastian Bauer , Lukas Frederik Milles , Hermann Eduard Gaub
Biophysical Journal 110 ( 3)

2016
Structural and mechanistic insights into mechanoactivation of focal adhesion kinase

Magnus Sebastian Bauer , Fabian Baumann , Csaba Daday , Pilar Redondo
Proceedings of the National Academy of Sciences of the United States of America 116 ( 14) 6766 -6774

81
2019
Energy profile of nanobody–GFP complex under force

Kamila Klamecka , Philip M Severin , Lukas F Milles , Hermann E Gaub
Physical Biology 12 ( 5) 056009 -056009

11
2015
12
2017
Extreme mechanical stability in protein complexes.

Lukas F Milles , Hermann E Gaub
Current Opinion in Structural Biology 60 124 -130

25
2020
38
2015
From genes to protein mechanics on a chip

Marcus Otten , Wolfgang Ott , Markus A Jobst , Lukas F Milles
Nature Methods 11 ( 11) 1127 -1130

58
2014
Corrigendum: From genes to protein mechanics on a chip

Marcus Otten , Wolfgang Ott , Markus A Jobst , Lukas F Milles
Nature Methods 12 ( 2) 160 -160

2015
Robust deep learning--based protein sequence design using ProteinMPNN

Justas Dauparas , Ivan Anishchenko , Nathaniel Bennett , Hua Bai
Science 378 ( 6615) 49 -56

79
2022
Broadly applicable and accurate protein design by integrating structure prediction networks and diffusion generative models

Joseph L Watson , David Juergens , Nathaniel R Bennett , Brian L Trippe
BioRxiv 2022 -12

9
2022
Scaffolding protein functional sites using deep learning

Jue Wang , Sidney Lisanza , David Juergens , Doug Tischer
Science 377 ( 6604) 387 -394

43
2022
Language models generalize beyond natural proteins

Robert Verkuil , Ori Kabeli , Yilun Du , Basile IM Wicky
bioRxiv 2022 -12

2
2022
2023
De novo design of protein structure and function with RFdiffusion

Joseph L Watson , David Juergens , Nathaniel R Bennett , Brian L Trippe
Nature 620 ( 7976) 1089 -1100

359
2023
De novo design of knotted tandem repeat proteins

Lindsey A Doyle , Brittany Takushi , Ryan D Kibler , Lukas F Milles
Nature Communications 14 ( 1) 6746 -6746

4
2023
Deep learning methods for designing proteins scaffolding functional sites

Jue Wang , Sidney Lisanza , David Juergens , Doug Tischer
BioRxiv 2021.11. 10.468128 -2021.11. 10.468128

35
2021
Improving protein expression, stability, and function with ProteinMPNN

Kiera H Sumida , Reyes Núñez-Franco , Indrek Kalvet , Samuel J Pellock
Journal of the American Chemical Society 146 ( 3) 2054 -2061

19
2024
Hallucination of closed repeat proteins containing central pockets

Linna An , Derrick R Hicks , Dmitri Zorine , Justas Dauparas
Nature Structural & Molecular Biology 30 ( 11) 1755 -1760

5
2023