Applications of analytic and geometry concepts of the theory of Calculus of Variations to the Intrinsic Reaction Coordinate model

A. Aguilar-Mogas , R. Crehuet , X. Giménez , J. M. Bofill
Molecular Physics 105 ( 19) 2475 -2492

14
2007
iMet: A computational tool for structural annotation of unknown metabolites from tandem mass spectra. arXiv 2016

A Aguilar-Mogas , M Sales-Pardo , M Navarro , R Tautenhahn
arXiv preprint arXiv:1607.04122

5
A Bayesian machine scientist to aid in the solution of challenging scientific problems

Marta Sales-Pardo , Roger Guimera , Antoni Aguilar-Mogas , Francesco A Massucci
arXiv: Learning

51
2020
iMet: A Network-Based Computational Tool To Assist in the Annotation of Metabolites from Tandem Mass Spectra

Antoni Aguilar-Mogas , Marta Sales-Pardo , Miriam Navarro , Roger Guimerà
Analytical Chemistry 89 ( 6) 3474 -3482

26
2017
On the implementation of the Runge-Kutta-Fehlberg algorithm to integrate intrinsic reaction coordinate paths

Antoni Aguilar-Mogas , Xavier Giménez , Josep Maria Bofill
Chemical Physics Letters 432 ( 1) 375 -382

9
2006
Implementation of an algorithm based on the Runge‐Kutta‐Fehlberg technique and the potential energy as a reaction coordinate to locate intrinsic reaction paths

Antoni Aguilar-Mogas , Xavier Giménez , Josep Maria Bofill
Journal of Computational Chemistry 31 ( 13) 2510 -2525

11
2010
A comprehensive study on different modelling approaches to predict platelet deposition rates in a perfusion chamber

Jordi Pallarès , Oriol Senan , Roger Guimerà , Anton Vernet
Scientific Reports 5 ( 1) 13606 -13606

3
2015
A Bohmian total potential view to quantum effects. II: decay of temporarily trapped states

María F. González , Antoni Aguilar-Mogas , Javier González , Ramon Crehuet
Theoretical Chemistry Accounts 123 ( 1) 51 -58

3
2009
The reaction between HO and (H2O)n (n = 1, 3) clusters: reaction mechanisms and tunneling effects

Javier Gonzalez , Marc Caballero , Antoni Aguilar-Mogas , Miquel Torrent-Sucarrat
Theoretical Chemistry Accounts 128 ( 4) 579 -592

33
2011
Exploration of cyclopropyl radical ring opening to allyl radical by Newton trajectories: importance of valley-ridge inflection points to understand the topography

Wolfgang Quapp , Josep Maria Bofill , Antoni Aguilar-Mogas
Theoretical Chemistry Accounts 129 ( 6) 803 -821

18
2011
Finding reaction paths using the potential energy as reaction coordinate.

Antoni Aguilar-Mogas , Xavier Giménez , Josep Maria Bofill
Journal of Chemical Physics 128 ( 10) 104102

17
2008
CliqueMS: a computational tool for annotating in-source metabolite ions from LC-MS untargeted metabolomics data based on a coelution similarity network.

Oriol Senan , Antoni Aguilar-Mogas , Miriam Navarro , Jordi Capellades
Bioinformatics 35 ( 20) 4089 -4097

62
2019
Remission of obesity and insulin resistance is not sufficient to restore mitochondrial homeostasis in visceral adipose tissue

Alba Gonzalez-Franquesa , Pau Gama-Perez , Marta Kulis , Karolina Szczepanowska
Redox Biology 54 102353

4
2022
iMet: A computational tool for structural annotation of unknown metabolites from tandem mass spectra

Antoni Aguilar-Mogas , Marta Sales-Pardo , Miriam Navarro , Ralf Tautenhahn
arXiv preprint arXiv:1607.04122

5
2016
Journal: Molecular Physics

Antoni Aguilar-Mogas , Xavier Giménez

2007