A comprehensive study on different modelling approaches to predict platelet deposition rates in a perfusion chamber

作者: Jordi Pallarès , Oriol Senan , Roger Guimerà , Anton Vernet , Antoni Aguilar-Mogas

DOI: 10.1038/SREP13606

关键词:

摘要: Thrombus formation is a multiscale phenomenon triggered by platelet deposition over protrombotic surface (eg. ruptured atherosclerotic plaque). Despite the medical urgency for computational tools that aid in early diagnosis of thrombotic events, integration models thrombus at different scales requires comprehensive understanding role and limitation each modelling approach. We propose three approaches to predict deposition. Specifically, we consider measurements under blood flow conditions perfusion chamber time periods (3, 5, 10, 20 30 minutes) shear rates 212 s−1, 1390 s−1 1690 s−1. Our are: i) model based on mass-transfer boundary layer theory; ii) machine-learning approach; iii) phenomenological model. The results indicate average have median errors 21%, 20.7% 14.2%, respectively. study demonstrates feasibility using an empirical data set as proxy real-patient scenario which practitioners accumulated given number patients want obtain new patient about whom they only current observation certain variables.

参考文章(41)
Dipti Patel, Heikki Väänänen, Markéta Jiroušková, Thomas Hoffmann, Carol Bodian, Barry S. Coller, Dynamics of GPIIb/IIIa-mediated platelet-platelet interactions in platelet adhesion/thrombus formation on collagen in vitro as revealed by videomicroscopy Blood. ,vol. 101, pp. 929- 936 ,(2003) , 10.1182/BLOOD.V101.3.929
Peng Zhang, Na Zhang, Yuefan Deng, Danny Bluestein, A multiple time stepping algorithm for efficient multiscale modeling of platelets flowing in blood plasma Journal of Computational Physics. ,vol. 284, pp. 668- 686 ,(2015) , 10.1016/J.JCP.2015.01.004
Klaus Affeld, Leonid Goubergrits, Nobuo Watanabe, Ulrich Kertzscher, Numerical and experimental evaluation of platelet deposition to collagen coated surface at low shear rates. Journal of Biomechanics. ,vol. 46, pp. 430- 436 ,(2013) , 10.1016/J.JBIOMECH.2012.10.030
David M. Wootton, Christos P. Markou, Stephen R. Hanson, David N. Ku, A mechanistic model of acute platelet accumulation in thrombogenic stenoses. Annals of Biomedical Engineering. ,vol. 29, pp. 321- 329 ,(2001) , 10.1114/1.1359449
David L. Bark, David N. Ku, Platelet Transport Rates and Binding Kinetics at High Shear over a Thrombus Biophysical Journal. ,vol. 105, pp. 502- 511 ,(2013) , 10.1016/J.BPJ.2013.05.049
Carol Kilkenny, William J. Browne, Innes C. Cuthill, Michael Emerson, Douglas G. Altman, Improving Bioscience Research Reporting: The ARRIVE Guidelines for Reporting Animal Research PLoS Biology. ,vol. 8, pp. e1000412- 99 ,(2010) , 10.1371/JOURNAL.PBIO.1000412
Prashanthi Vandrangi, Martha Sosa, John Y-J Shyy, Victor GJ Rodgers, None, Flow-Dependent Mass Transfer May Trigger Endothelial Signaling Cascades PLoS ONE. ,vol. 7, pp. e35260- ,(2012) , 10.1371/JOURNAL.PONE.0035260
Jordi Pallares, Francesc Xavier Grau, Mass transfer rate of a first-order chemical reaction on a wall at high Schmidt numbers International Journal of Heat and Mass Transfer. ,vol. 69, pp. 438- 442 ,(2014) , 10.1016/J.IJHEATMASSTRANSFER.2013.10.040
Peng Zhang, Chao Gao, Na Zhang, Marvin J. Slepian, Yuefan Deng, Danny Bluestein, Multiscale Particle-Based Modeling of Flowing Platelets in Blood Plasma Using Dissipative Particle Dynamics and Coarse Grained Molecular Dynamics Cellular and Molecular Bioengineering. ,vol. 7, pp. 552- 574 ,(2014) , 10.1007/S12195-014-0356-5