Multiplatform single-sample estimates of transcriptional activation

S. R. Piccolo , M. R. Withers , O. E. Francis , A. H. Bild
Proceedings of the National Academy of Sciences of the United States of America 110 ( 44) 17778 -17783

72
2013
Topsentinol L Trisulfate, a Marine Natural Product That Targets Basal-like and Claudin-Low Breast Cancers.

Andrea H Bild , Andrea H Bild , Philip J Moos , Stephen R Piccolo
Marine Drugs 19 ( 1) 41

2021
A Survey of Compound Heterozygous Variants in Pediatric Cancers and Structural Birth Defects.

Stephen R Piccolo , Dustin B Miller
Frontiers in Genetics 12 640242 -640242

2021
The molecular landscape of pediatric acute myeloid leukemia reveals recurrent structural alterations and age-specific mutational interactions.

Hamid Bolouri , Jason E Farrar , Timothy Triche Jr , Rhonda E Ries
Nature Medicine 24 ( 1) 103 -112

205
2018
Evaluation of genetic risk scores for lipid levels using genome-wide markers in the Framingham Heart Study

Stephen R Piccolo , Ryan P Abo , Kristina Allen-Brady , Nicola J Camp
BMC Proceedings 3 ( 7) 1 -7

25
2009
Multiplicity: an organizing principle for cancers and somatic mutations

Lewis J Frey , Stephen R Piccolo , Mary E Edgerton
BMC Medical Genomics 4 ( 1) 52 -52

3
2011
Genomic pathway analysis reveals that EZH2 and HDAC4 represent mutually exclusive epigenetic pathways across human cancers

Adam L Cohen , Stephen R Piccolo , Luis Cheng , Rafaella Soldi
BMC Medical Genomics 6 ( 1) 35 -35

35
2013
Integrative analyses reveal signaling pathways underlying familial breast cancer susceptibility

Stephen R Piccolo , Laura M Hoffman , Thomas Conner , Gajendra Shrestha
Molecular Systems Biology 12 ( 3) 860 -860

13
2016
Inferring pathway dysregulation in cancers from multiple types of omic data

Shelley M MacNeil , William E Johnson , Dean Y Li , Stephen R Piccolo
Genome Medicine 7 ( 1) 61 -61

11
2015
ShinyLearner: A containerized benchmarking tool for machine-learning classification of tabular data.

Stephen R Piccolo , Terry J Lee , Erica Suh , Kimball Hill
GigaScience 9 ( 4)

4
2020
The DNA methylation landscape of five pediatric-tumor types

Alyssa C Parker , Badí I Quinteros , Stephen R Piccolo
PeerJ 10 e13516

2022
Bioinformatic analysis of the tumor biomarker thymidine kinase 1: Elucidating its cancer gene network and membrane expression across all cancers

Edwin J Velazquez , David M Bellini , Rachel A Skabelund , Tyler B Humpherys
Cancer Research 81 ( 13\_Supplement) 2134 -2134

2021
TidyGEO: Preparing analysis-ready datasets from Gene Expression Omnibus

Avery Mecham , Ashlie Stephenson , Badí I Quinteros , Grace Salmons
bioRxiv 2023 -02

2023
Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease

Genevera I Allen , Nicola Amoroso , Catalina Anghel , Venkat Balagurusamy
Alzheimers & Dementia 12 ( 6) 645 -653

67
2016
Predicting drug sensitivity of cancer cells based on DNA methylation levels

Sofia P Miranda , Fernanda A Baião , Julia L Fleck , Stephen R Piccolo
PloS one 16 ( 9) e0238757 -e0238757

10
2021