Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay.

Anne Favel , Igor V Grigoriev , Igor V Grigoriev , Martina Štursová
Environmental Microbiology

31
2021
Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation.

Byoungnam Min , Hongjae Park , Yeongseon Jang , Jae-Jin Kim
Journal of Biotechnology 211 42 -43

13
2015
Metabolically engineered glucose-utilizing Shewanella strains under anaerobic conditions.

Donggeon Choi , Sae Bom Lee , Sohyun Kim , Byoungnam Min
Bioresource Technology 154 59 -66

57
2014
FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.

Byoungnam Min , Igor V Grigoriev , In-Geol Choi
Bioinformatics 33 ( 18) 2936 -2937

24
2017
Genomics of wood-degrading fungi

Robin A. Ohm , Robert Riley , Asaf Salamov , Byoungnam Min
Fungal Genetics and Biology 72 82 -90

76
2014
5
2017
Genomic discovery of the hypsin gene and biosynthetic pathways for terpenoids in Hypsizygus marmoreus.

Byoungnam Min , Seunghwan Kim , Youn-Lee Oh , Won-Sik Kong
BMC Genomics 19 ( 1) 789

19
2018
Novel Monomeric Fungal Subtilisin Inhibitor from a Plant-Pathogenic Fungus, Choanephora cucurbitarum: Isolation and Molecular Characterization.

Duleepa Pathiraja , Youngeun Chun , Junghwan Cho , Byoungnam Min
Applied and Environmental Microbiology 86 ( 22) 1 -16

1
2020
Comprehensive genomic and transcriptomic analysis of polycyclic aromatic hydrocarbon degradation by a mycoremediation fungus, Dentipellis sp. KUC8613

Hongjae Park , Byoungnam Min , Yeongseon Jang , Jungyeon Kim
Applied Microbiology and Biotechnology 103 ( 19) 8145 -8155

14
2019
Prokaryotic Contig Annotation Pipeline Server: Web Application for a Prokaryotic Genome Annotation Pipeline Based on the Shiny App Package

Byeonghyeok Park , Min-Jeong Baek , Byoungnam Min , In-Geol Choi
Journal of Computational Biology 24 ( 9) 917 -922

3
2017
A global phylogenomic analysis of the shiitake genus Lentinula

Sean Sierra-Patev , Byoungnam Min , Miguel Naranjo-Ortiz , Brian Looney
Proceedings of the National Academy of Sciences 120 ( 10) e2214076120

2023
Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales

Gang Wu , Shingo Miyauchi , Emmanuelle Morin , Alan Kuo
New Phytologist 233 ( 3) 1383 -1400

10
2022
The obligate alkalophilic soda‐lake fungus Sodiomyces alkalinus has shifted to a protein diet

Alexey A Grum‐Grzhimaylo , Daniel L Falkoski , Joost van den Heuvel , Claudio A Valero‐Jiménez
Molecular ecology 27 ( 23) 4808 -4819

25
2018
RNA-editing in Basidiomycota, revisited

Byoungnam Min , Baojun Wu , Jill Gaskell , Jiwei Zhang
ISME communications 1 ( 1) 70 -70

2
2021
Transcriptomics of Temporal-versus Substrate-Specific Wood Decay in the Brown-Rot Fungus Fibroporia radiculosa

Byoungnam Min , Steven Ahrendt , Anna Lipzen , Cristina E Toapanta
Journal of Fungi 9 ( 10) 1029 -1029

2023
Draft Genome Sequence of the Reference Strain of the Korean Medicinal Mushroom Wolfiporia cocos KMCC03342

Bogun Kim , Byoungnam Min , Jae-Gu Han , Hongjae Park
Mycobiology 50 ( 4) 254 -257

2
2022
Practical Guide for Fungal Gene Prediction from Genome Assembly and RNA-Seq Reads by FunGAP

Byoungnam Min , In-Geol Choi
Gene Prediction: Methods and Protocols 53 -64

1
2019