Quality control of ribosomal RNAs

Mutsuhito Ohno , Makoto Kitabatake , Kotaro Fujii
Tanpakushitsu kakusan koso. Protein nucleic acid enzyme 54 2195

2009
VELCRO-IP RNA-seq reveals ribosome expansion segment function in translation genome-wide.

Kathrin Leppek , Gun Woo Byeon , Maria Barna , Kotaro Fujii
Cell Reports 34 ( 3) 108629

2021
Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics

Kathrin Leppek , Gun Woo Byeon , Wipapat Kladwang , Hannah K Wayment-Steele
bioRxiv

46
2021
Crt10 directs the cullin-E3 ligase Rtt101 to nonfunctional 25S rRNA decay.

Tomoko Sakata , Kotaro Fujii , Mutsuhito Ohno , Makoto Kitabatake
Biochemical and Biophysical Research Communications 457 ( 1) 90 -94

4
2015
Decoding the Function of Expansion Segments in Ribosomes

Kotaro Fujii , Teodorus Theo Susanto , Saumya Saurabh , Maria Barna
Molecular Cell 72 ( 6) 1013 -1020.e6

67
2018
Gene- and Species-Specific Hox mRNA Translation by Ribosome Expansion Segments.

Kathrin Leppek , Kotaro Fujii , Nick Quade , Teodorus Theo Susanto
Molecular Cell 80 ( 6)

32
2020
VELCRO-IP RNA-seq explores ribosome expansion segment function in translation genome-wide

Kathrin Leppek , Gun Woo Byeon , Kotaro Fujii , Maria Barna
bioRxiv

1
2020
Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide

Zhen Shi , Kotaro Fujii , Kyle M. Kovary , Naomi R. Genuth
Molecular Cell 67 ( 1) 71

480
2017
Pervasive translational regulation of the cell signalling circuitry underlies mammalian development

Kotaro Fujii , Zhen Shi , Olena Zhulyn , Nicolas Denans
Nature Communications 8 ( 1) 14443 -14443

32
2017
40S subunit dissociation and proteasome-dependent RNA degradation in nonfunctional 25S rRNA decay.

Kotaro Fujii , Makoto Kitabatake , Tomoko Sakata , Mutsuhito Ohno
The EMBO Journal 31 ( 11) 2579 -2589

42
2012
RNA regulons in Hox 5′ UTRs confer ribosome specificity to gene regulation

Shifeng Xue , Siqi Tian , Kotaro Fujii , Wipapat Kladwang
Nature 517 ( 7532) 33 -38

275
2015
Gene-and Species-Specific Translation by Ribosome Expansion Segments

Kathrin Leppek , Kotaro Fujii , Nick Quade , Teodorus Theo Susanto
Available at SSRN 3634264

1
2020
Controlling tissue patterning by translational regulation of signaling transcripts through the core translation factor eIF3c

Kotaro Fujii , Olena Zhulyn , Gun Woo Byeon , Naomi R Genuth
Developmental Cell 56 ( 21) 2928 -2937. e9

12
2021
Silver nanoparticles enhance the efficacy of aminoglycosides against antibiotic-resistant bacteria

Autumn S Dove , Dominika I Dzurny , Wren R Dees , Nan Qin
Frontiers in Microbiology 13 1064095 -1064095

26
2023
Tag-free rapid enrichment of ribosome-associated proteins across cell types, tissues, and species

Teodorus Theo Susanto , Victoria Hung , Kotaro Fujii , Maria Barna
MOLECULAR & CELLULAR PROTEOMICS 18 ( 8) S78 -S78

2019
A role for ubiquitin in the clearance of nonfunctional rRNAs

K. Fujii , M. Kitabatake , T. Sakata , A. Miyata
Genes & Development 23 ( 8) 963 -974

89
2009
Aguilar, RN 320 Alió, JL 27 Allansmith, MR 187,335 A1 Samarrai, A. 21

D Armstrong , R Barrett , C Baudouin , C Baumstark-Khan