cis-regulatory requirements for tissue-specific programs of the circadian clock.

Antonio C.A. Meireles-Filho , Anaïs F. Bardet , J. Omar Yáñez-Cuna , Gerald Stampfel
Current Biology 24 ( 1) 1 -10

289
2014
YAP1 Exerts Its Transcriptional Control via TEAD-Mediated Activation of Enhancers

Claudia Stein , Anais Flore Bardet , Guglielmo Roma , Sebastian Bergling
PLOS Genetics 11 ( 8) e1005465

178
2015
Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity

Thomas Dahlet , Andrea Argüeso Lleida , Hala Al Adhami , Michael Dumas
Nature Communications 11 ( 1) 1 -14

80
2020
A Histone Deacetylase Adjusts Transcription Kinetics at Coding Sequences during Candida albicans Morphogenesis

Denes Hnisz , Anaïs F. Bardet , Clarissa J. Nobile , Andriy Petryshyn
PLOS Genetics 8 ( 12)

67
2012
Single amino acid repeats in signal peptides.

Paweł P. Łabaj , Germán G. Leparc , Anaïs F. Bardet , Günther Kreil
FEBS Journal 277 ( 15) 3147 -3157

12
2010
Identification of transcription factor binding sites from ChIP-seq data at high resolution

Anaïs F. Bardet , Jonas Steinmann , Sangeeta Bafna , Juergen A. Knoblich
Bioinformatics 29 ( 21) 2705 -2713

47
2013
B7-H3 is a potent inhibitor of human T-cell activation: No evidence for B7-H3 and TREML2 interaction.

Judith Leitner , Christoph Klauser , Winfried F. Pickl , Johannes Stöckl
European Journal of Immunology 39 ( 7) 1754 -1764

180
2009
Loss of Apc Rapidly Impairs DNA Methylation Programs and Cell Fate Decisions in Lgr5+ Intestinal Stem Cells.

Marco Bruschi , Laure Garnier , Elouan Cleroux , Alicia Giordano
Cancer Research 80 ( 11) 2101 -2113

12
2020
Practical Guide to ChIP-seq Data Analysis

Anaïs F Bardet , Borbala Mifsud , Kathi Zarnack

2018
High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species

Qiye He , Anaïs F Bardet , Brianne Patton , Jennifer Purvis
Nature Genetics 43 ( 5) 414 -420

114
2011
A computational pipeline for comparative ChIP-seq analyses

Anaïs F Bardet , Qiye He , Julia Zeitlinger , Alexander Stark
Nature Protocols 7 ( 1) 45 -61

137
2012
E2F6 initiates stable epigenetic silencing of germline genes during embryonic development

Thomas Dahlet , Matthias Truss , Ute Frede , Hala Al Adhami
Nature communications 12 ( 1) 3582

15
2021
The BTB-domain transcription factor ZBTB2 recruits chromatin remodelers and a histone chaperone during the exit from pluripotency

Daniel Olivieri , Sujani Paramanathan , Anaïs F Bardet , Daniel Hess
Journal of Biological Chemistry 297 ( 2)

10
2021
Conserved Cis-Acting Range Extender Element Mediates Extreme Long-Range Enhancer Activity in Mammals

Grace Bower , Ethan Hollingsworth , Sandra Jacinto , Benjamin Clock
bioRxiv 2024.05. 26.595809 -2024.05. 26.595809

2024
Competition between DNA methylation and transcription factors determines binding of NRF1

Silvia Domcke , Anaïs Flore Bardet , Paul Adrian Ginno , Dominik Hartl
Nature 528 ( 7583) 575 -579

424
2015
YAP1 Exerts Its Transcriptional Control via TEAD-Mediated Activation of Enhancers

Claudia Stein , Anais Flore Bardet , Guglielmo Roma , Sebastian Bergling
PLOS Genetics 11 ( 8) e1005465

178
2015
Sensitivity of transcription factors to DNA methylation.

Éléa Héberlé , Anaïs Flore Bardet ,
Essays in Biochemistry 63 ( 6) 727 -741

149
2019
TFmotifView: a webserver for the visualization of transcription factor motifs in genomic regions

Clémentine Leporcq , Yannick Spill , Delphine Balaramane , Christophe Toussaint
Nucleic Acids Research 48

24
2020
A comparative methylome analysis reveals conservation and divergence of DNA methylation patterns and functions in vertebrates

Hala Al Adhami , Anaïs Flore Bardet , Michael Dumas , Elouan Cleroux
BMC biology 20 ( 1) 1 -18

3
2022
Pan-cancer predictions of transcription factors mediating aberrant DNA methylation

Dylane Detilleux , Yannick G Spill , Delphine Balaramane , Michaël Weber
Epigenetics \& Chromatin 15 ( 1) 10

6
2022