YAP1 Exerts Its Transcriptional Control via TEAD-Mediated Activation of Enhancers

作者: Claudia Stein , Anais Flore Bardet , Guglielmo Roma , Sebastian Bergling , Ieuan Clay

DOI: 10.1371/JOURNAL.PGEN.1005465

关键词:

摘要: YAP1 is a major effector of the Hippo pathway and well-established oncogene. Elevated activity due to mutations in components or amplification observed several types human cancers. Here we investigated its genomic binding landscape YAP1-activated cancer cells, as well non-transformed cells. We demonstrate that TEAD transcription factors mediate chromatin-binding genome-wide, further explaining their dominant role primary mediators YAP1-transcriptional activity. Moreover, show largely exerts transcriptional control via distal enhancers are marked by H3K27 acetylation necessary for this chromatin mark at bound associated genes. This work establishes YAP1-mediated regulation provides an expanded set target genes resulting fundamental source study function normal setting.

参考文章(98)
Simon Anders, Wolfgang Huber, Differential expression analysis for sequence count data. Genome Biology. ,vol. 11, pp. 1- 12 ,(2010) , 10.1186/GB-2010-11-10-R106
Eunjeong Seo, Upal Basu-Roy, Preethi H. Gunaratne, Cristian Coarfa, Dae-Sik Lim, Claudio Basilico, Alka Mansukhani, SOX2 regulates YAP1 to maintain stemness and determine cell fate in the osteo-adipo lineage. Cell Reports. ,vol. 3, pp. 2075- 2087 ,(2013) , 10.1016/J.CELREP.2013.05.029
Alvaro Rada-Iglesias, Ruchi Bajpai, Tomek Swigut, Samantha A. Brugmann, Ryan A. Flynn, Joanna Wysocka, A unique chromatin signature uncovers early developmental enhancers in humans Nature. ,vol. 470, pp. 279- 283 ,(2011) , 10.1038/NATURE09692
Alex Vassilev, Kotaro J Kaneko, Hongjun Shu, Yingming Zhao, Melvin L DePamphilis, TEAD/TEF transcription factors utilize the activation domain of YAP65, a Src/Yes-associated protein localized in the cytoplasm Genes & Development. ,vol. 15, pp. 1229- 1241 ,(2001) , 10.1101/GAD.888601
Fernando D. Camargo, Sumita Gokhale, Jonathan B. Johnnidis, Dongdong Fu, George W. Bell, Rudolf Jaenisch, Thijn R. Brummelkamp, YAP1 Increases Organ Size and Expands Undifferentiated Progenitor Cells Current Biology. ,vol. 17, pp. 2054- 2060 ,(2007) , 10.1016/J.CUB.2007.10.039
B. Zhao, X. Ye, J. Yu, L. Li, W. Li, S. Li, J. Yu, J. D. Lin, C.-Y. Wang, A. M. Chinnaiyan, Z.-C. Lai, K.-L. Guan, TEAD mediates YAP-dependent gene induction and growth control Genes & Development. ,vol. 22, pp. 1962- 1971 ,(2008) , 10.1101/GAD.1664408
Nathaniel D Heintzman, Rhona K Stuart, Gary Hon, Yutao Fu, Christina W Ching, R David Hawkins, Leah O Barrera, Sara Van Calcar, Chunxu Qu, Keith A Ching, Wei Wang, Zhiping Weng, Roland D Green, Gregory E Crawford, Bing Ren, Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nature Genetics. ,vol. 39, pp. 311- 318 ,(2007) , 10.1038/NG1966
Hideki Murakami, Tetsuya Mizuno, Tetsuo Taniguchi, Makiko Fujii, Futoshi Ishiguro, Takayuki Fukui, Shinya Akatsuka, Yoshitsugu Horio, Toyoaki Hida, Yutaka Kondo, Shinya Toyokuni, Hirotaka Osada, Yoshitaka Sekido, LATS2 is a tumor suppressor gene of malignant mesothelioma. Cancer Research. ,vol. 71, pp. 873- 883 ,(2011) , 10.1158/0008-5472.CAN-10-2164
Mark D. Biggin, Animal transcription networks as highly connected, quantitative continua. Developmental Cell. ,vol. 21, pp. 611- 626 ,(2011) , 10.1016/J.DEVCEL.2011.09.008
Yong Zhang, Tao Liu, Clifford A Meyer, Jérôme Eeckhoute, David S Johnson, Bradley E Bernstein, Chad Nusbaum, Richard M Myers, Myles Brown, Wei Li, X Shirley Liu, None, Model-based Analysis of ChIP-Seq (MACS) Genome Biology. ,vol. 9, pp. 1- 9 ,(2008) , 10.1186/GB-2008-9-9-R137