Virtual screening for PPAR-gamma ligands using the ISOAK molecular graph kernel and gaussian processes

作者: T Schroeter , M Rupp , K Hansen , K-R Müller , G Schneider

DOI: 10.1186/1752-153X-3-S1-P15

关键词: Theoretical computer scienceComputational biologyPeroxisome proliferator-activated receptorKernel (statistics)Molecular graphReceptorComputer scienceGraph kernelNuclear receptorTranscription factorVirtual screening

摘要: For a virtual screening study, we introduce combination of machine learning techniques, employing graph kernel, Gaussian process regression and clustered cross-validation. The aim was to find ligands peroxisome-proliferator activated receptor gamma (PPAR-y). receptors in the PPAR family belong steroid-thyroid-retinoid superfamily nuclear act as transcription factors. They play role regulation lipid glucose metabolism vertebrates are linked various human processes diseases. this used dataset 176 PPAR-y agonists published by Ruecker et al. ...

参考文章(1)
Thomas G. Dietterich, Machine-Learning Research Ai Magazine. ,vol. 18, pp. 97- 136 ,(1997) , 10.1609/AIMAG.V18I4.1324