Method for discovering novel DNA viruses in blood using viral particle selection and shotgun sequencing

作者: Mya Breitbart , Forest Rohwer

DOI: 10.2144/000112019

关键词: Selection (genetic algorithm)Blood supplyHuman bloodPopulationDNACloningShotgun sequencingGeneticsVirusBiology

摘要: Rapid identification of viruses is needed to monitor the blood supply for emerging threats. Here we present a method that meets these criteria and allows shotgun sequencing novel, uncultured DNA directly from human blood. This employs selection based on physical properties combined with sequence-independent amplification cloning. We show both single- double-stranded can be recovered samples using this approach. In addition, report discovery novel anellovirus sequences in healthy donors. PCR primers designed amplify were then used verify presence general donor population.

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