Biochemical characterization of the castor bean ent-kaurene synthase(-like) family supports quantum chemical view of diterpene cyclization.

作者: Alana J. Jackson , David M. Hershey , Taylor Chesnut , Meimei Xu , Reuben J. Peters

DOI: 10.1016/J.PHYTOCHEM.2014.04.005

关键词: Ent-kaurene synthaseATP synthaseBiosynthesisSynthetic biologyRicinusDiterpeneRNA splicingBiochemistryGeneBiology

摘要: It has become apparent that plants have extensively diversified their arsenal of labdane-related diterpenoids (LRDs), in part via gene duplication and neo-functionalization the ancestral ent-kaurene synthase (KS) required for gibberellin metabolism. For example, castor bean (Ricinus communis) was previously shown to produce an interesting set biosynthetically related diterpenes, specifically ent-sandracopimaradiene, ent-beyerene, ent-trachylobane, addition ent-kaurene, using four separate diterpene synthases, albeit these remain unidentified. Notably, despite mechanistic similarity underlying reaction catalyzed by KSs, ent-beyerene ent-trachylobane synthases not yet been identified. Given our interest LRD biosynthesis, recent availability genome sequence, a synthetic biology approach applied biochemically characterize KS(-like) enzymes [KS(L)s] found Ricinus communis [i.e., RcKS(L)s]. In particular, bacteria engineered relevant ent-copalyl diphosphate precursor genes based on predicted RcKS(L)s, although this ultimately correction "splicing" error one genes, highlighting dependence such accurate sequences. Nevertheless, it is possible assign each RcKS(L)s observed activities, providing access functionally enzymes. Intriguingly, product distribution seems support distinct mechanism proposed quantum chemical calculations, rather than classically pathway.

参考文章(39)
Christophe Sallaud, Cécile Giacalone, Romy Töpfer, Simon Goepfert, Nicolas Bakaher, Sandrine Rösti, Alain Tissier, Characterization of two genes for the biosynthesis of the labdane diterpene Z‐abienol in tobacco (Nicotiana tabacum) glandular trichomes Plant Journal. ,vol. 72, pp. 1- 17 ,(2012) , 10.1111/J.1365-313X.2012.05068.X
Matthew L. Hillwig, Meimei Xu, Tomonobu Toyomasu, Mollie S. Tiernan, Gao Wei, Guanghong Cui, Luqi Huang, Reuben J. Peters, Domain loss has independently occurred multiple times in plant terpene synthase evolution The Plant Journal. ,vol. 68, pp. 1051- 1060 ,(2011) , 10.1111/J.1365-313X.2011.04756.X
Hiroshi Kawaide, Ken-ichiro Hayashi, Ryo Kawanabe, Yuka Sakigi, Akihiko Matsuo, Masahiro Natsume, Hiroshi Nozaki, Identification of the single amino acid involved in quenching the ent-kauranyl cation by a water molecule in ent-kaurene synthase of Physcomitrella patens. FEBS Journal. ,vol. 278, pp. 123- 133 ,(2011) , 10.1111/J.1742-4658.2010.07938.X
Dana Morrone, Meimei Xu, D. Bruce Fulton, Mara K. Determan, Reuben J. Peters, Increasing complexity of a diterpene synthase reaction with a single residue switch. Journal of the American Chemical Society. ,vol. 130, pp. 5400- 5401 ,(2008) , 10.1021/JA710524W
Reuben J. Peters, Two rings in them all: The labdane-related diterpenoids Natural Product Reports. ,vol. 27, pp. 1521- 1530 ,(2010) , 10.1039/C0NP00019A
Tomonobu TOYOMASU, Hiroshi KAWAIDE, Atsuko ISHIZAKI, Shoko SHINODA, Minoru OTSUKA, Wataru MITSUHASHI, Takeshi SASSA, Cloning of a full-length cDNA encoding ent-kaurene synthase from Gibberella fujikuroi: functional analysis of a bifunctional diterpene cyclase. Bioscience, Biotechnology, and Biochemistry. ,vol. 64, pp. 660- 664 ,(2000) , 10.1271/BBB.64.660
Ke Zhou, Meimei Xu, Mollie Tiernan, Qian Xie, Tomonobu Toyomasu, Chizu Sugawara, Madoka Oku, Masami Usui, Wataru Mitsuhashi, Makiko Chono, Peter M. Chandler, Reuben J. Peters, Functional characterization of wheat ent-kaurene(-like) synthases indicates continuing evolution of labdane-related diterpenoid metabolism in the cereals. Phytochemistry. ,vol. 84, pp. 47- 55 ,(2012) , 10.1016/J.PHYTOCHEM.2012.08.021
Mustafa Köksal, Yinghua Jin, Robert M. Coates, Rodney Croteau, David W. Christianson, Taxadiene synthase structure and evolution of modular architecture in terpene biosynthesis Nature. ,vol. 469, pp. 116- 120 ,(2011) , 10.1038/NATURE09628
Young J. Hong, Dean J. Tantillo, Formation of Beyerene, Kaurene, Trachylobane, and Atiserene Diterpenes by Rearrangements That Avoid Secondary Carbocations Journal of the American Chemical Society. ,vol. 132, pp. 5375- 5386 ,(2010) , 10.1021/JA9084786
Arnab Roy, Frank G. Roberts, P. Ross Wilderman, Ke Zhou, Reuben J. Peters, Robert M. Coates, 16-Aza-ent-beyerane and 16-Aza-ent-trachylobane: Potent Mechanism-Based Inhibitors of Recombinant ent-Kaurene Synthase from Arabidopsis thaliana Journal of the American Chemical Society. ,vol. 129, pp. 12453- 12460 ,(2007) , 10.1021/JA072447E