The fate of competing beneficial mutations in an asexual population

作者: Philip J. Gerrish , Richard E. Lenski

DOI: 10.1007/978-94-011-5210-5_12

关键词: PopulationBiologyMutation rateClonal interferenceHuman geneticsGeneticsFixation (population genetics)

摘要: In sexual populations, beneficial mutations that occur in different lineages may be recombined into a single lineage. asexual however, clones carry such alternative compete with one another and, thereby, interfere the expected progression of given mutation to fixation. From theoretical exploration ‘clonal interference’, we have derived (1) fixation probability for mutations, (2) an substitution rate, (3) coefficient selection realized substitutions, (4) rate fitness increase, (5) transiently achieves polymorphic frequency (≥ 1%), and (6) majority status. Based on (3), were able estimate distribution mutational effects from changes mean evolving E. coli population.

参考文章(31)
John H. Gillespie, The causes of molecular evolution ,(1991)
Y Iwasa, A Sasaki, K Ishii, H Matsuda, Evolutionarily stable mutation rate in a periodically changing environment Genetics. ,vol. 121, pp. 163- 174 ,(1989) , 10.1093/GENETICS/121.1.163
Michael C. Whitlock, Sarah P. Otto, The Probability of Fixation in Populations of Changing Size Genetics. ,vol. 146, pp. 723- 733 ,(1997) , 10.1093/GENETICS/146.2.723
N H Barton, Linkage and the limits to natural selection. Genetics. ,vol. 140, pp. 821- 841 ,(1995) , 10.1093/GENETICS/140.2.821
Richard E. Lenski, Michael R. Rose, Suzanne C. Simpson, Scott C. Tadler, Long-Term Experimental Evolution in Escherichia coli. I. Adaptation and Divergence During 2,000 Generations The American Naturalist. ,vol. 138, pp. 1315- 1341 ,(1991) , 10.1086/285289
J. W. Drake, A constant rate of spontaneous mutation in DNA-based microbes. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 88, pp. 7160- 7164 ,(1991) , 10.1073/PNAS.88.16.7160
R. E. Lenski, M. Travisano, Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations Proceedings of the National Academy of Sciences of the United States of America. ,vol. 91, pp. 6808- 6814 ,(1994) , 10.1073/PNAS.91.15.6808
E. C. Holmes, L. Q. Zhang, P. Simmonds, C. A. Ludlam, A. J. Brown, Convergent and divergent sequence evolution in the surface envelope glycoprotein of human immunodeficiency virus type 1 within a single infected patient Proceedings of the National Academy of Sciences of the United States of America. ,vol. 89, pp. 4835- 4839 ,(1992) , 10.1073/PNAS.89.11.4835