The origins of eukaryotic-like proteins in Legionella pneumophila

作者: Mor N. Lurie-Weinberger , Laura Gomez-Valero , Nathalie Merault , Gernot Glöckner , Carmen Buchrieser

DOI: 10.1016/J.IJMM.2010.04.016

关键词: GeneticsLegionellaMicrobiologyVirulencePhylogeneticsHorizontal gene transferLegionella pneumophilaMimivirusGeneBiologySynonymous substitution

摘要: Legionella pneumophila, the causative agent of Legionnaires' disease, is known to be an intracellular pathogen multiple species protozoa and assumed have co-evolved with these organisms for millions years. Genome sequencing L. pneumophila strains has revealed abundance eukaryotic-like proteins (ELPs). Here, we study evolution ELPs, in order investigate their origin. Thirty-four new ELPs were identified, based on a higher similarity eukaryotic than bacterial ones. Phylogenetic analyses demonstrated that both lateral gene transfer from hosts genes became by gradual adaptation milieu or fragment acquisition, contributed existing repertoire which comprise over 3% putative proteome strains. A PCR survey 72 showed most conserved nearly all strains, indicating they are likely play important roles this species. Genes different evolutionary origin distinct patterns selection, as reflected ratio synonymous vs. mutations. One ELP common several Legionella, but outside genus homologs only Acanthamoeba polyphaga mimivirus, exchange involving viruses pathogens may also contribute virulence either groups organisms. Information selection status was combined novel approach predict type IV secretion system effectors represent promising targets future study.

参考文章(54)
Rafik Dey, Jacques Bodennec, Mouh Oulhadj Mameri, Pierre Pernin, Free-living freshwater amoebae differ in their susceptibility to the pathogenic bacterium Legionella pneumophila Fems Microbiology Letters. ,vol. 290, pp. 10- 17 ,(2009) , 10.1111/J.1574-6968.2008.01387.X
Barry S. Fields, Robert F. Benson, Richard E. Besser, Legionella and Legionnaires' Disease: 25 Years of Investigation Clinical Microbiology Reviews. ,vol. 15, pp. 506- 526 ,(2002) , 10.1128/CMR.15.3.506-526.2002
Kazutaka Katoh, Kei-ichi Kuma, Hiroyuki Toh, Takashi Miyata, MAFFT version 5: improvement in accuracy of multiple sequence alignment Nucleic Acids Research. ,vol. 33, pp. 511- 518 ,(2005) , 10.1093/NAR/GKI198
Stéphane Guindon, Olivier Gascuel, A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology. ,vol. 52, pp. 696- 704 ,(2003) , 10.1080/10635150390235520
F. Supek, K. Vlahovicek, INCA: synonymous codon usage analysis and clustering by means of self-organizing map Bioinformatics. ,vol. 20, pp. 2329- 2330 ,(2004) , 10.1093/BIOINFORMATICS/BTH238
S. Guindon, F. Lethiec, P. Duroux, O. Gascuel, PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Research. ,vol. 33, pp. 557- 559 ,(2005) , 10.1093/NAR/GKI352
Michael Steinert, Ute Hentschel, Jörg Hacker, Legionella pneumophila: an aquatic microbe goes astray. Fems Microbiology Reviews. ,vol. 26, pp. 149- 162 ,(2002) , 10.1111/J.1574-6976.2002.TB00607.X
Vincent Daubin, Howard Ochman, Bacterial Genomes as New Gene Homes: The Genealogy of ORFans in E. coli Genome Research. ,vol. 14, pp. 1036- 1042 ,(2004) , 10.1101/GR.2231904