Cryo-EM reveals active site coordination within a multienzyme pre-rRNA processing complex

作者: Monica C. Pillon , Allen L. Hsu , Juno M. Krahn , Jason G. Williams , Kevin H. Goslen

DOI: 10.1038/S41594-019-0289-8

关键词: BiochemistryNucleaseRibosomeRNARibosomal RNAChemistryEndoribonucleaseRibosome assemblyRNase PRRNA processing

摘要: Ribosome assembly is a complex process reliant on the coordination of trans-acting enzymes to produce functional ribosomal subunits and secure translational capacity cells. The endoribonuclease (RNase) Las1 polynucleotide kinase (PNK) Grc3 assemble into multienzyme complex, herein designated RNase PNK, orchestrate processing precursor RNA (rRNA). PNK belongs functionally diverse HEPN nuclease superfamily, whose members rely distinct cues for activation. To establish how coordinates its dual enzymatic activities, we solved series cryo-EM structures Chaetomium thermophilum in multiple conformational states. reveal that adopts butterfly-like architecture, harboring composite active site flanked by discrete sites. We identify two molecular switches coordinate function. Together, our corresponding studies new mechanism activation essential ribosome production.

参考文章(60)
Crystal Young, Katrin Karbstein, Analysis of Cofactor Effects on RNA Helicases Methods in Enzymology. ,vol. 511, pp. 213- 237 ,(2012) , 10.1016/B978-0-12-396546-2.00010-3
Christopher D. Castle, Erica K. Cassimere, Catherine Denicourt, LAS1L interacts with the mammalian Rix1 complex to regulate ribosome biogenesis Molecular Biology of the Cell. ,vol. 23, pp. 716- 728 ,(2012) , 10.1091/MBC.E11-06-0530
Derek F. Ceccarelli, Leo C.K. Wan, Yu-Chi Juang, Daniel Y.L. Mao, Christina Gaughan, Margo A. Brinton, Andrey A. Perelygin, Igor Kourinov, Alba Guarné, Robert H. Silverman, Frank Sicheri, Hao Huang, Elton Zeqiraj, Beihua Dong, Babal Kant Jha, Nicole M. Duffy, Stephen Orlicky, Neroshan Thevakumaran, Manisha Talukdar, Monica C. Pillon, Dimeric Structure of Pseudokinase RNase L Bound to 2-5A Reveals a Basis for Interferon-Induced Antiviral Activity Molecular Cell. ,vol. 53, pp. 221- 234 ,(2014) , 10.1016/J.MOLCEL.2013.12.025
Aytac Dikfidan, Bernhard Loll, Cathleen Zeymer, Iris Magler, Tim Clausen, Anton Meinhart, RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase clp1. Molecular Cell. ,vol. 54, pp. 975- 986 ,(2014) , 10.1016/J.MOLCEL.2014.04.005
S. Schillewaert, L. Wacheul, F. Lhomme, D. L. J. Lafontaine, The Evolutionarily Conserved Protein LAS1 Is Required for Pre-rRNA Processing at Both Ends of ITS2 Molecular and Cellular Biology. ,vol. 32, pp. 430- 444 ,(2012) , 10.1128/MCB.06019-11
Axel T Brunger, Version 1.2 of the Crystallography and NMR system Nature Protocols. ,vol. 2, pp. 2728- 2733 ,(2007) , 10.1038/NPROT.2007.406
H Hu, S A Haas, J Chelly, H Van Esch, M Raynaud, A P M de Brouwer, S Weinert, G Froyen, S G M Frints, F Laumonnier, T Zemojtel, M I Love, H Richard, A-K Emde, M Bienek, C Jensen, M Hambrock, U Fischer, C Langnick, M Feldkamp, W Wissink-Lindhout, N Lebrun, L Castelnau, J Rucci, R Montjean, O Dorseuil, P Billuart, T Stuhlmann, M Shaw, M A Corbett, A Gardner, S Willis-Owen, C Tan, K L Friend, S Belet, K E P van Roozendaal, M Jimenez-Pocquet, M-P Moizard, N Ronce, R Sun, S O'Keeffe, R Chenna, A van Bömmel, J Göke, A Hackett, M Field, L Christie, J Boyle, E Haan, J Nelson, G Turner, G Baynam, G Gillessen-Kaesbach, U Müller, D Steinberger, B Budny, M Badura-Stronka, A Latos-Bieleńska, L B Ousager, P Wieacker, G Rodríguez Criado, M-L Bondeson, G Annerén, A Dufke, M Cohen, L Van Maldergem, C Vincent-Delorme, B Echenne, B Simon-Bouy, T Kleefstra, M Willemsen, J-P Fryns, K Devriendt, R Ullmann, M Vingron, K Wrogemann, T F Wienker, A Tzschach, H van Bokhoven, J Gecz, T J Jentsch, W Chen, H-H Ropers, V M Kalscheuer, X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes Molecular Psychiatry. ,vol. 21, pp. 133- 148 ,(2016) , 10.1038/MP.2014.193
Christopher D. Castle, Erica K. Cassimere, Jinho Lee, Catherine Denicourt, Las1L Is a Nucleolar Protein Required for Cell Proliferation and Ribosome Biogenesis Molecular and Cellular Biology. ,vol. 30, pp. 4404- 4414 ,(2010) , 10.1128/MCB.00358-10