Identification of quantitative trait loci for Na+, K+ and Ca++ accumulation traits in rice grown under saline conditions using F2 mapping population

作者: Md. Shah Kamal Khan , Muhammad Saeed , Javed Iqbal

DOI: 10.1007/S40415-015-0160-Z

关键词: Locus (genetics)HorticultureBiologySodiumSalinityMajor geneAlleleQuantitative trait locusCultivarPopulationBotany

摘要: Salinity affects rice production worldwide. Quantitative trait loci (QTL) for different sodium (Na+), potassium (K+), and calcium (Ca++) accumulation traits were detected using 113 F2 individuals derived from a cross between IR36 (salt-susceptible) Pokkali (salt-tolerant) cultivars. 17 QTLs detected; three under control conditions, saline 11 relative value datasets. These located on chromosomes 1, 3, 4, 5, 6, 7, 8 11, respectively. The R 2 (phenotypic variance explained) these ranged 7.69 to 72.57 %. identified 7 novel as there no previous reports of Na+ uptake (SU) K+ (PU) genomic regions. PU ratio (PUR) had significant positive correlation with grain yield conditions. PUR (QTLpur-3, QTLpurr-5-1, QTLpurr-5-2) will be helpful increasing salt stress A major locus controlling (QTLsur-7) was chromosome This may gene involved in SU. Additive effect the salt-tolerant cultivar, alleles increased this by 0.16 %. QTL is important respect exclusion good candidate marker-assisted selection.

参考文章(39)
Folkard Asch, Michael Dingkuhn, Karl Dörffling, Kouame Miezan, Leaf K/Na ratio predicts salinity induced yield loss in irrigated rice Euphytica. ,vol. 113, pp. 109- 118 ,(2000) , 10.1023/A:1003981313160
D Mackill, K Deal, J Dvorak, G Gregorio, P S Bonilla, RFLP and SSLP mapping of salinity tolerance genes in chromosome 1 of rice (Oryza sativa L.) using recombinant inbred lines Philippine Agricultural Scientist (Philippines). ,vol. 85, pp. 64- 74 ,(2002)
Runsen Pan, Weiren Wu, Huaqing Liu, Yuanlin Duan, Yongbiao Xue, Jianmin Qi, Damei Mao, Weiming Li, Zhiwei Chen, Danfeng Zhang, Lihui Lin, Yuanchang Zhou, Genetic analysis and mapping of gene fzp(t) controlling spikelet differentiation in rice. Science China-life Sciences. ,vol. 46, pp. 328- 334 ,(2003) , 10.1360/03YC9035
C. N. Chaubey, D. Senadhira, Conventional Plant Breeding for Tolerance to Problem Soils Soil mineral stresses: approaches to crop improvement.. pp. 11- 36 ,(1994) , 10.1007/978-3-642-84289-4_2
Maribel L Dionisio-Sese, Satoshi Tobita, Antioxidant responses of rice seedlings to salinity stress Plant Science. ,vol. 135, pp. 1- 9 ,(1998) , 10.1016/S0168-9452(98)00025-9
S. Lutts, J.M. Kinet, J. Bouharmont, Changes in plant response to NaCl during development of rice (Oryza sativa L.) varieties differing in salinity resistance Journal of Experimental Botany. ,vol. 46, pp. 1843- 1852 ,(1995) , 10.1093/JXB/46.12.1843
John Damien Platten, James A Egdane, Abdelbagi M Ismail, Salinity tolerance, Na+ exclusion and allele mining of HKT1;5 in Oryza sativa and O. glaberrima: many sources, many genes, one mechanism? BMC Plant Biology. ,vol. 13, pp. 32- 32 ,(2013) , 10.1186/1471-2229-13-32
Khadijeh Ghomi, Babak Rabiei, Hossein Sabouri, Atefeh Sabouri, Mapping QTLs for Traits Related to Salinity Tolerance at Seedling Stage of Rice (Oryza sativa L.): An Agrigenomics Study of an Iranian Rice Population OMICS: A Journal of Integrative Biology. ,vol. 17, pp. 242- 251 ,(2013) , 10.1089/OMI.2012.0097
Jin-Lin Zhang, Timothy J. Flowers, Suo-Min Wang, Mechanisms of sodium uptake by roots of higher plants Plant and Soil. ,vol. 326, pp. 45- 60 ,(2010) , 10.1007/S11104-009-0076-0
S. Y. Lee, J. H. Ahn, Y. S. Cha, D. W. Yun, M. C. Lee, J. C. Ko, K. S. Lee, M. Y. Eun, Mapping QTLs related to salinity tolerance of rice at the young seedling stage Plant Breeding. ,vol. 126, pp. 43- 46 ,(2007) , 10.1111/J.1439-0523.2007.01265.X