The function of integron-associated gene cassettes in Vibrio species: the tip of the iceberg

作者: Rita A. Rapa , Maurizio Labbate

DOI: 10.3389/FMICB.2013.00385

关键词: GenomeBiologyAntibiotic resistanceGeneIntegronHorizontal gene transferMobile genetic elementsGene cassettePlasmidGenetics

摘要: The integron is a genetic element that incorporates mobile genes termed gene cassettes into reserved site via site-specific recombination. It best known for its role in antibiotic resistance with one type of integron, the class 1 major player dissemination across Gram negative pathogens and commensals. However, integrons are ancient structures over 100 classes (including 1) present bacteria from broader environment. While, only example an being mobilised clinical environment, it by far most successful. Unlike which largely found on plasmids, other chromosomes carry diverse indicating non-antibiotic role(s). there very limited knowledge what these alternative roles are. This particularly relevant to Vibrio species where make up approximately 1-3% their entire genome. In this review, we discuss how emphasis research has resulted understanding wider community capacity be counterproductive solving or improving problem future. Furthermore, still significant lack drive adaptation evolution. From V. rotiferianus DAT722, new insight affect cellular physiology offers cassette resource. At least subset involved host surface polysaccharide modification suggesting may important processes such as bacteriophage resistance, adhesion/biofilm formation, protection grazers bacterial aggregation.

参考文章(49)
Maurizio Labbate, Rebecca Josephine Case, Hatch W. Stokes, The Integron/gene cassette system : an active player in bacterial adaptation Methods of Molecular Biology. ,vol. 532, pp. 103- 125 ,(2009) , 10.1007/978-1-60327-853-9_6
Kyung-Jo Lee, Jeong-A Kim, Won Hwang, Soon-Jung Park, Kyu-Ho Lee, Role of capsular polysaccharide (CPS) in biofilm formation and regulation of CPS production by quorum-sensing in Vibrio vulnificus Molecular Microbiology. ,vol. 90, pp. 841- 857 ,(2013) , 10.1111/MMI.12401
Silvia Szekeres, Mira Dauti, Caroline Wilde, Didier Mazel, Dean A. Rowe-Magnus, Chromosomal toxin-antitoxin loci can diminish large-scale genome reductions in the absence of selection. Molecular Microbiology. ,vol. 63, pp. 1588- 1605 ,(2007) , 10.1111/J.1365-2958.2007.05613.X
Hatch W. Stokes, Michael R. Gillings, Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into Gram-negative pathogens Fems Microbiology Reviews. ,vol. 35, pp. 790- 819 ,(2011) , 10.1111/J.1574-6976.2011.00273.X
Maurizio Labbate, Yan Boucher, Piklu Chowdhury, Hatch W Stokes, Integration of a laterally acquired gene into a cell network important for growth in a strain of Vibrio rotiferianus BMC Microbiology. ,vol. 11, pp. 253- 253 ,(2011) , 10.1186/1471-2180-11-253
D. A. Rowe-Magnus, Integrase-directed recovery of functional genes from genomic libraries Nucleic Acids Research. ,vol. 37, ,(2009) , 10.1093/NAR/GKP561
Bin Li, Yongfei Hu, Qi Wang, Yong Yi, Patrick C. Y. Woo, Hua Jing, Baoli Zhu, Cui Hua Liu, Structural Diversity of Class 1 Integrons and Their Associated Gene Cassettes in Klebsiella pneumoniae Isolates from a Hospital in China PLoS ONE. ,vol. 8, pp. e75805- ,(2013) , 10.1371/JOURNAL.PONE.0075805
J. E. Koenig, Yan Boucher, Robert L. Charlebois, Camilla Nesbø, Olga Zhaxybayeva, Eric Bapteste, Matthew Spencer, Michael J. Joss, H. W. Stokes, W. F. Doolittle, Integron-associated gene cassettes in Halifax Harbour: assessment of a mobile gene pool in marine sediments. Environmental Microbiology. ,vol. 10, pp. 1024- 1038 ,(2008) , 10.1111/J.1462-2920.2007.01524.X
Didier Mazel, Broderick Dychinco, Vera A Webb, Julian Davies, A Distinctive Class of Integron in the Vibrio cholerae Genome Science. ,vol. 280, pp. 605- 608 ,(1998) , 10.1126/SCIENCE.280.5363.605
Hosam Elsaied, H. W. Stokes, Takamichi Nakamura, Keiko Kitamura, Hiroyuki Fuse, Akihiko Maruyama, Novel and diverse integron integrase genes and integron-like gene cassettes are prevalent in deep-sea hydrothermal vents Environmental Microbiology. ,vol. 9, pp. 2298- 2312 ,(2007) , 10.1111/J.1462-2920.2007.01344.X