Evaluation of non-invasive genetic sampling methods for estimating tiger population size

作者: Samrat Mondol , K. Ullas Karanth , N. Samba Kumar , Arjun M. Gopalaswamy , Anish Andheria

DOI: 10.1016/J.BIOCON.2009.05.014

关键词: Abundance estimationPantheraFeliformiaSampling (statistics)Abundance (ecology)StatisticsEcologyPopulation sizeBiologyPopulationMark and recapture

摘要: Abstract There is often a conservation need to estimate population abundances of elusive, low-density, wide-ranging carnivore species. Because logistical constraints, investigators employ non-invasive ‘captures’ that may involve ‘genetic’ or ‘photographic’ sampling in such cases. Established capture–recapture (CR) methods offer powerful analytical tool for data. In this paper, we developed rigorous combination captive, laboratory and field-based protocols identifying individual tigers (Panthera tigris) from fecal DNA. We explored trade-offs between numbers microsatellite loci used reliable identifications the higher capture rates robust analyses. Our field surveys scats were also specifically designed CR analyses, enabling us test closure, probabilities tiger abundance. Consequently, could compare genetic estimates results ‘photographic capture’ study at same site. The using heterogeneity model (Mh-Jackknife) DNA survey [Mt+1 = 26; p ¯ ˆ = 0.09 N ( S E [ ] )=66 (12.98)] close agreement with those photographic [(Mt+1 = 29; 0.04 ) = 66 (13.8)]. revealed designing explicitly data analyses generate probability abundance low density species as tigers. highlights importance estimation contexts where other approaches camera-trapping physical tagging animals not be practical options.

参考文章(73)
Tim L. King, Joseph D. Clark, Mark R. Boersen, Mark R. Boersen, Estimating black bear population density and genetic diversity at Tensas River, Louisiana using microsatellite DNA markers Wildlife Society Bulletin. ,vol. 31, pp. 197- 207 ,(2003)
J. D. Nichols, K.U. Karanth, N.S. Kumar, Photographic sampling of elusive mammals in tropical forests pp. 229- 247 ,(2004)
Garth Mowat, David Paetkau, Estimating marten Martes americana population size using hair capture and genetic tagging Wildlife Biology. ,vol. 8, pp. 201- 209 ,(2002) , 10.2981/WLB.2002.034
C. MIQUEL, E. BELLEMAIN, C. POILLOT, J. BESSIÈRE, A. DURAND, P. TABERLET, Quality indexes to assess the reliability of genotypes in studies using noninvasive sampling and multiple‐tube approach Molecular Ecology Notes. ,vol. 6, pp. 985- 988 ,(2006) , 10.1111/J.1471-8286.2006.01413.X
Thomas R. Stanley, Kenneth P. Burnham, A closure test for time-specific capture-recapture data Environmental and Ecological Statistics. ,vol. 6, pp. 197- 209 ,(1999) , 10.1023/A:1009674322348
ALAIN C. FRANTZ, MICHEL SCHAUL, LISA C. POPE, FRED FACK, LAURENT SCHLEY, CLAUDE P. MULLER, TIMOTHY J. ROPER, Estimating population size by genotyping remotely plucked hair: the Eurasian badger Journal of Applied Ecology. ,vol. 41, pp. 985- 995 ,(2004) , 10.1111/J.0021-8901.2004.00951.X
V. Morell, Can the Wild Tiger Survive Science. ,vol. 317, pp. 1312- 1314 ,(2007) , 10.1126/SCIENCE.317.5843.1312