The Relationship between Microbial Community Evenness and Function in Slow Sand Filters

作者: Sarah-Jane Haig , Christopher Quince , Robert L Davies , Caetano C Dorea , Gavin Collins

DOI: 10.1128/MBIO.00729-15

关键词: Slow sand filterMultivariate statisticsEcologyBiologyMicrobial population biologySampling (statistics)Species evennessMicrobial ecologyBiotaWater quality

摘要: Two full-scale slow sand filters (SSFs) were sampled periodically from April until November 2011 to study the spatial and temporal structures of bacterial communities found in filters. To monitor global changes microbial communities, DNA samples taken at different depths locations within SSFs ages was used for Illumina 16S rRNA gene sequencing. Additionally, 15 water quality parameters monitored assess filter performance, with functionally relevant members being identified by using multivariate statistics. The diversity be much larger than previously documented, community composition shaped characteristics (filter age depth) sampling (month, side, distance influent effluent pipes). We that several key genera (Acidovorax, Halomonas, Sphingobium, Sphingomonas) associated performance. In addition, whole-community level, a strong positive correlation between species evenness This is first comprehensively characterize link specific microbes parameters. doing so, we reveal patterns structure relate overall function.

参考文章(44)
Arnaud Deschesne, Céline Pallud, Geneviève L. Grundmann, Spatial Distribution Of Bacteria At The Microscale In Soil Springer, Dordrecht. pp. 87- 107 ,(2007) , 10.1007/978-1-4020-6216-2_4
Ben R. Urbonas, Design of a sand filter for stormwater quality enhancement Water Environment Research. ,vol. 71, pp. 102- 113 ,(1999) , 10.2175/106143099X121625
C. A. Fewson, Metabolism of Aromatic Compounds by Acinetobacter Springer, Boston, MA. pp. 351- 390 ,(1991) , 10.1007/978-1-4899-3553-3_23
Monroe L. Weber-Shirk, Richard I. Dick, Biological mechanisms in slow sand filters Journal - American Water Works Association. ,vol. 89, pp. 72- 83 ,(1997) , 10.1002/J.1551-8833.1997.TB08180.X
Daniel Yekutieli, Yoav Benjamini, THE CONTROL OF THE FALSE DISCOVERY RATE IN MULTIPLE TESTING UNDER DEPENDENCY Annals of Statistics. ,vol. 29, pp. 1165- 1188 ,(2001) , 10.1214/AOS/1013699998
Andrew Eaton, A.E. Greenberg, Lenore S. Clesceri, Standard methods for the examination of water and wastewater Published in <b>1998</b> in Washington DC) by American public health association. ,(1992)
Sarah-Jane Haig, Melanie Schirmer, Rosalinda D'Amore, Joseph Gibbs, Robert L Davies, Gavin Collins, Christopher Quince, Stable-isotope probing and metagenomics reveal predation by protozoa drives E. coli removal in slow sand filters. The ISME Journal. ,vol. 9, pp. 797- 808 ,(2015) , 10.1038/ISMEJ.2014.175
Hong Wang, Marsha A. Pryor, Marc A. Edwards, Joseph O. Falkinham, Amy Pruden, Effect of GAC pre-treatment and disinfectant on microbial community structure and opportunistic pathogen occurrence Water Research. ,vol. 47, pp. 5760- 5772 ,(2013) , 10.1016/J.WATRES.2013.06.052
Ilaria Pizzetti, Bernhard M. Fuchs, Gunnar Gerdts, Antje Wichels, Karen H. Wiltshire, Rudolf Amann, Temporal Variability of Coastal Planctomycetes Clades at Kabeltonne Station, North Sea Applied and Environmental Microbiology. ,vol. 77, pp. 5009- 5017 ,(2011) , 10.1128/AEM.02931-10