jmzTab: A Java interface to the mzTab data standard

摘要: mzTab is the most recent standard format developed by Proteomics Standards Initiative. a flexible tab-delimited file that can capture identification and quantification results coming from MS-based proteomics metabolomics approaches. We here present an open-source Java application programming interface for called jmzTab. The software allows efficient processing of files, providing read write capabilities, designed to be embedded in other packages. second key feature jmzTab model it provides framework maintain logical integrity between metadata table-based sections files. In this article, as two example implementations, we also describe stand-alone tools used validate files convert PRIDE XML mzTab. library freely available at http://mztab.googlecode.com.