DNA nanomapping using CRISPR-Cas9 as a programmable nanoparticle
作者： Andrey Mikheikin , Anita Olsen , Kevin Leslie , Freddie Russell-Pavier , Andrew Yacoot
DOI: 10.1038/S41467-017-01891-9
关键词: Physical mapping 、 DNA 、 CRISPR 、 DNA nanotechnology 、 Genomics 、 Proof of concept 、 Atomic force microscopy 、 Computational biology 、 Dna genetics 、 Computer science
摘要: … Here, we report two technical advances in DNA nanotechnology and single-molecule genomics: (1) we describe a labeling technique (CRISPR-Cas9 nanoparticles) for high-speed AFM…
nature.com
core.ac.uk
harvard.edu
bristol.ac.uk
sci-hub.se 参考文章(46)
Zhongwu Lai, Junping Jing, Christopher Aston, Virginia Clarke, Jennifer Apodaca, Eileen T. Dimalanta, Daniel J. Carucci, Malcolm J. Gardner, Bud Mishra, Thomas S. Anantharaman, Salvatore Paxia, Stephen L. Hoffman, J. Craig Venter, Edward J. Huff, David C. Schwartz, A shotgun optical map of the entire Plasmodium falciparum genome Nature Genetics. ,vol. 23, pp. 309- 313 ,(1999) , 10.1038/15484
Thaddeus Judkins, Eric Rosenthal, Christopher Arnell, Lynn Anne Burbidge, Wade Geary, Toby Barrus, Jeremy Schoenberger, Jeffrey Trost, Richard J. Wenstrup, Benjamin B. Roa, Clinical significance of large rearrangements in BRCA1 and BRCA2 Cancer. ,vol. 118, pp. 5210- 5216 ,(2012) , 10.1002/CNCR.27556
Olga K. Weinberg, Weiyun Z. Ai, M. Rajan Mariappan, Carol Shum, Ronald Levy, Daniel A. Arber, ″Minor″ BCL2 Breakpoints in Follicular Lymphoma : Frequency and Correlation with Grade and Disease Presentation in 236 Cases The Journal of Molecular Diagnostics. ,vol. 9, pp. 530- 537 ,(2007) , 10.2353/JMOLDX.2007.070038
Gilbert M. Lenoir, Gilbert M. Lenoir, Jean Feunteun, Sylvie Mazoyer, Sylvie Mazoyer, Olga M. Serova-Sinilnikova, Olga M. Serova-Sinilnikova, Henry T. Lynch, Nadine Puget, Nadine Puget, Delphine Torchard, A 1-kb Alu-mediated germ-line deletion removing BRCA1 exon 17. Cancer Research. ,vol. 57, pp. 828- 831 ,(1997)
Takashi Uchiyama, Chiyoko Ueda, Masayuki Kurata, Hiroshi Akasaka, Takashi Akasaka, Akira Shimizu, Hitoshi Ohno, Molecular Anatomy of BCL6 Translocations Revealed by Long-Distance Polymerase Chain Reaction-based Assays Cancer Research. ,vol. 60, pp. 2335- 2341 ,(2000)
T.S. ANANTHARAMAN, V. MYSORE, B. MISHRA, Fast and cheap genome wide haplotype construction via optical mapping. pacific symposium on biocomputing. pp. 385- 396 ,(2004) , 10.1142/9789812702456_0037
E.-T. Hwu, S.-K. Hung, C.-W. Yang, I.-S. Hwang, K.-Y. Huang, Simultaneous detection of translational and angular displacements of micromachined elements Applied Physics Letters. ,vol. 91, pp. 221908- ,(2007) , 10.1063/1.2817750
H.-S. Liao, K.-Y. Huang, I.-S. Hwang, T.-J. Chang, Wesley W. Hsiao, H.-H. Lin, E.-T. Hwu, C.-S. Chang, Operation of astigmatic-detection atomic force microscopy in liquid environments Review of Scientific Instruments. ,vol. 84, pp. 103709- ,(2013) , 10.1063/1.4826494
THOMAS S. ANANTHARAMAN, BUD MISHRA, DAVID C. SCHWARTZ, Genomics via optical mapping with ordered restriction maps Journal of Computational Biology. ,vol. 4, pp. 91- 118 ,(1998) , 10.1089/CMB.1997.4.91
Andrew H Laszlo, Ian M Derrington, Brian C Ross, Henry Brinkerhoff, Andrew Adey, Ian C Nova, Jonathan M Craig, Kyle W Langford, Jenny Mae Samson, Riza Daza, Kenji Doering, Jay Shendure, Jens H Gundlach, Decoding long nanopore sequencing reads of natural DNA Nature Biotechnology. ,vol. 32, pp. 829- 833 ,(2014) , 10.1038/NBT.2950