Autoantibody microarrays for biomarker discovery.

作者: Robert J Caiazzo Jr , Oliver W Tassinari , Joshua R Ehrlich , Brian CS Liu

DOI: 10.1586/14789450.4.2.261

关键词: AutoantibodyMicroarrayProteomicsDNA microarrayComputational biologyBiomarker discoveryMultiplexBioinformaticsBiology

摘要: Identification of autoantigens and the detection autoantibody reactivity are useful in biomarker discovery for explaining role important biochemical pathways disease. Despite all their potential advantages, main challenge to working with autoantibodies is sensitivity. Nevertheless, proteomics may hold key overcoming this limitation by providing means multiplex. Clearly, ability detect multiple using a platform such as high-density antigen microarray would improve sensitivity specificity profiling. The aims review to: briefly describe current status antigen–autoantibody microarrays; provide examples use discoveries; address limitations; strategies facilitate implementation clinical setting.

参考文章(39)
Alan W Partin, Robert W Veltri, Matthew B Gretzer, Daniel W Chan, Modern Tumor Marker Discovery in Urology: Surface Enhanced Laser Desorption and Ionization (SELDI). Reviews in urology. ,vol. 5, pp. 81- ,(2003)
Robert L. Ochs, Thomas W. Stein, Carol L. Peebles, Ruben F. Gittes, Eng M. Tan, Autoantibodies in interstitial cystitis. The Journal of Urology. ,vol. 151, pp. 587- 592 ,(1994) , 10.1016/S0022-5347(17)35023-1
William H Robinson, Wolfgang Hueber, Paul J Utz, Lawrence Steinman, Autoantibody profiling for the study and treatment of autoimmune disease Arthritis Research & Therapy. ,vol. 4, pp. 290- 295 ,(2002) , 10.1186/AR426
S. Keay, C.-O. Zhang, A.L. Trifillis, J.R. Hebel, S.C. Jacobs, J.W. Warren, Urine Autoantibodies in Interstitial Cystitis The Journal of Urology. ,vol. 157, pp. 1083- 1087 ,(1997) , 10.1016/S0022-5347(01)65146-2
Visith Thongboonkerd, Somchai Chutipongtanate, Rattiyaporn Kanlaya, Systematic Evaluation of Sample Preparation Methods for Gel-Based Human Urinary Proteomics: Quantity, Quality, and Variability Journal of Proteome Research. ,vol. 5, pp. 183- 191 ,(2006) , 10.1021/PR0502525
Sen-Yung Hsieh, Ren-Kung Chen, Yi-Hsin Pan, Hai-Lun Lee, Systematical evaluation of the effects of sample collection procedures on low-molecular-weight serum/plasma proteome profiling. Proteomics. ,vol. 6, pp. 3189- 3198 ,(2006) , 10.1002/PMIC.200500535
Li Zhong, Sarah P. Coe, Arnold J. Stromberg, Nada H. Khattar, James R. Jett, Edward A. Hirschowitz, Profiling Tumor-Associated Antibodies for Early Detection of Non-small Cell Lung Cancer Journal of Thoracic Oncology. ,vol. 1, pp. 513- 519 ,(2006) , 10.1016/S1556-0864(15)30352-X
Eng M. Tan, Autoantibodies as reporters identifying aberrant cellular mechanisms in tumorigenesis. Journal of Clinical Investigation. ,vol. 108, pp. 1411- 1415 ,(2001) , 10.1172/JCI14451
Kerri Bouwman, Ji Qiu, Heping Zhou, Mark Schotanus, Leslie A. Mangold, Robert Vogt, Erik Erlandson, John Trenkle, Alan W. Partin, David Misek, Gilbert S. Omenn, Brian B. Haab, Samir Hanash, Microarrays of tumor cell derived proteins uncover a distinct pattern of prostate cancer serum immunoreactivity. Proteomics. ,vol. 3, pp. 2200- 2207 ,(2003) , 10.1002/PMIC.200300611
Jian-Ying Zhang, Tumor-associated antigen arrays to enhance antibody detection for cancer diagnosis. Cancer Detection and Prevention. ,vol. 28, pp. 114- 118 ,(2004) , 10.1016/J.CDP.2003.12.006