Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

作者: Ronan C. O'Malley , Julian Tonti-Filippini , Brian D. Gregory , Charles C. Berry , A. Harvey Millar

DOI: 10.1016/J.CELL.2008.03.029

关键词: Epigenetics of physical exerciseDNA methyltransferaseBiologyDNA methylationRNA-Directed DNA MethylationBisulfite sequencingEpigenomicsHistone methylationIllumina Methylation AssayGenetics

摘要: Deciphering the multiple layers of epigenetic regulation that control transcription is critical to understanding how plants develop and respond to their environment. Using sequencing-by-…

参考文章(34)
Michael Wassenegger, RNA-directed DNA methylation. Plant Molecular Biology. ,vol. 43, pp. 203- 220 ,(2000) , 10.1023/A:1006479327881
Zhihui Yu, Thomas E. Bureau, Stephen I. Wright, Mutator-like Elements in Arabidopsis thaliana: Structure, Diversity and Evolution Genetics. ,vol. 156, pp. 2019- 2031 ,(2000) , 10.1093/GENETICS/156.4.2019
Mark W. Kankel, Jeremy R. Haag, Michelle L. Verbsky, Trevor L. Stokes, Nicole C. Riddle, Eric J. Richards, Susan K. Flowers, Douglas E. Ramsey, Jeffrey A. Jeddeloh, Arabidopsis MET1 Cytosine Methyltransferase Mutants Genetics. ,vol. 163, pp. 1109- 1122 ,(2003) , 10.1093/GENETICS/163.3.1109
Ian R. Henderson, Steven E. Jacobsen, Epigenetic inheritance in plants Nature. ,vol. 447, pp. 418- 424 ,(2007) , 10.1038/NATURE05917
E. Jean Finnegan, Elizabeth S. Dennis, Isolation and identification by sequence homology of a putative cytosine methyltransferase from Arabidopsis thaliana. Nucleic Acids Research. ,vol. 21, pp. 2383- 2388 ,(1993) , 10.1093/NAR/21.10.2383
M. Frommer, L. E. McDonald, D. S. Millar, C. M. Collis, F. Watt, G. W. Grigg, P. L. Molloy, C. L. Paul, A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 89, pp. 1827- 1831 ,(1992) , 10.1073/PNAS.89.5.1827
Xiaofeng Cao, Steven E. Jacobsen, Role of the Arabidopsis DRM Methyltransferases in De Novo DNA Methylation and Gene Silencing Current Biology. ,vol. 12, pp. 1138- 1144 ,(2002) , 10.1016/S0960-9822(02)00925-9
Marjori Matzke, Tatsuo Kanno, Bruno Huettel, Lucia Daxinger, Antonius J.M. Matzke, Targets of RNA-directed DNA methylation. Current Opinion in Plant Biology. ,vol. 10, pp. 512- 519 ,(2007) , 10.1016/J.PBI.2007.06.007
Rachel Tompa, Claire M McCallum, Jeffrey Delrow, Jorja G Henikoff, Bas van Steensel, Steven Henikoff, Genome-Wide Profiling of DNA Methylation Reveals Transposon Targets of CHROMOMETHYLASE3 Current Biology. ,vol. 12, pp. 65- 68 ,(2002) , 10.1016/S0960-9822(01)00622-4
Werner Aufsatz, M. Mette, Antonius Matzke, Marjori Matzke, The role of MET1 in RNA-directed de novo and maintenance methylation of CG dinucleotides. Plant Molecular Biology. ,vol. 54, pp. 793- 804 ,(2004) , 10.1007/S11103-004-0179-1