Genetic analysis of potato tuber quality traits

作者: J.S. Werij

DOI:

关键词: GeneticsBiotechnologyCandidate geneTraitGenomicsQuantitative trait locusBiologyAllelePotato starchGenetic analysisPhenotypic trait

摘要: In this thesis the results of four year project P5 within Centre for BioSystems Genomics ( www.cbsg.nl ) are described. The intention was to gain understanding genetic principles underlying a series different potato tuber quality traits and development molecular markers linked interest. Molecular that can be used in breeding programs with aim producing varieties improved quality. To provide window which research placed, review current status genetics is given chapter 1. Here applicable described methodologies discussed. Enzymatic discoloration (ED) tubers investigated 2. QTL analysis trait itself an it’s potential substrates performed combination allele specificity study (including expression analysis) on candidate genes PPO. 3, starch related biosynthesis degradation by gene approach. Furthermore, 4 we analyzed metabolic content through liquid chromatography-time flight mass spectrometry (LC-QTOF MS). This resulted large set peaks. Clustering signals multivariate spectra reconstruction strategy revealed reconstructed metabolites (ea centrotypes). Quantitative Trait Locus (QTL) centrotypes over 800 metabolite QTLs (mQTLs), distributed all 12 chromosomes. investigate contribution metabolome phenotypic traits, mQTL were compared flesh colour (raw after-cooking) total protein content. Finally 5, general discussion, obtained preceding chapters discussed placed bigger perspective finding tools potato. Prospects basis these outlook presented as well.

参考文章(20)
Herman J. van Eck, Genetics of morphological and tuber traits Potato biology and biotechnology: advances and perspectives. pp. 91- 115 ,(2007) , 10.1016/B978-044451018-1/50048-8
I. B. Dry, S. P. Robinson, P. W. Thygesen, M. E. Vayda, W. R. Belknap, W. D. Park, Polyphenol oxidase in potato tubers. Belknap, W R [Editor], Vayda, M E [Editor], Park, W D [Editor] Biotechnology in Agriculture Series; The molecular and cellular biology of the potato. pp. 151- 159 ,(1994)
S. Feingold, J. Lloyd, N. Norero, M. Bonierbale, J. Lorenzen, Mapping and characterization of new EST-derived microsatellites for potato (Solanum tuberosum L.) Theoretical and Applied Genetics. ,vol. 111, pp. 456- 466 ,(2005) , 10.1007/S00122-005-2028-2
A. Heibges, H. Glaczinski, A. Ballvora, F. Salamini, C. Gebhardt, Structural diversity and organization of three gene families for Kunitz-type enzyme inhibitors from potato tubers (Solanum tuberosum L.). Molecular Genetics and Genomics. ,vol. 269, pp. 526- 534 ,(2003) , 10.1007/S00438-003-0860-0
Björn B. D’hoop, Maria João Paulo, Rolf A. Mank, Herman J. van Eck, Fred A. van Eeuwijk, Association mapping of quality traits in potato (Solanum tuberosum L.) Euphytica. ,vol. 161, pp. 47- 60 ,(2008) , 10.1007/S10681-007-9565-5
Rita Zrenner, Marcel Salanoubat, Lothar Willmitzer, Uwe Sonnewald, Evidence of the crucial role of sucrose synthase for sink strength using transgenic potato plants (Solanum tuberosum L.) Plant Journal. ,vol. 7, pp. 97- 107 ,(1995) , 10.1046/J.1365-313X.1995.07010097.X
Yongfei Zhang, Shuping Cheng, Darlene De Jong, Helen Griffiths, Rayko Halitschke, Walter De Jong, The potato R locus codes for dihydroflavonol 4-reductase Theoretical and Applied Genetics. ,vol. 119, pp. 931- 937 ,(2009) , 10.1007/S00122-009-1100-8
Wayne L. Morris, Heather A. Ross, Laurence J. M. Ducreux, John E. Bradshaw, Glenn J. Bryan, Mark A. Taylor, Umami compounds are a determinant of the flavor of potato (Solanum tuberosum L.). Journal of Agricultural and Food Chemistry. ,vol. 55, pp. 9627- 9633 ,(2007) , 10.1021/JF0717900
Melina Zourelidou, Marta de Torres-Zabala, Caroline Smith, Michael W. Bevan, Storekeeper defines a new class of plant-specific DNA-binding proteins and is a putative regulator of patatin expression. Plant Journal. ,vol. 30, pp. 489- 497 ,(2002) , 10.1046/J.1365-313X.2002.01302.X