Adaptive evolution of the chrysanthemyl diphosphate synthase gene involved in irregular monoterpene metabolism

作者: Ping-Li Liu , Jun-Nan Wan , Yan-Ping Guo , Song Ge , Guang-Yuan Rao

DOI: 10.1186/1471-2148-12-214

关键词: Farnesyl diphosphate synthaseEvolutionary biologyChrysanthemyl diphosphate synthaseGene familyBiologyGene duplicationGeneticsAnthemideaeFunctional divergenceGeneFunction (biology)

摘要: Chrysanthemyl diphosphate synthase (CDS) is a key enzyme in biosynthetic pathways producing pyrethrins and irregular monoterpenes. These compounds are confined to plants of the tribe Anthemideae Asteraceae, play an important role defending against herbivorous insects. It has been proposed that CDS genes arose from duplication farnesyl (FDS) gene have different function FDSs. However, time toward origin evolutionary force behind functional divergence still unknown. Two events were detected history FDS family second led CDS. occurred after Mutisieae other tribes Asteraceae but before birth tribe. After its origin, accumulated four mutations sites homologous substrate-binding catalysis FDS. Of these, two involved binding nucleophilic substrate isopentenyl Maximum likelihood analyses showed some under positive selection scattered throughout primary sequences, whereas three-dimensional structure model they clustered large central cavity. Positive associated with played major evolution

参考文章(67)
W. L. Delano, The PyMOL Molecular Graphics System DeLano Scientific. ,(2002)
John E. Casida, Minneapolis McLaughlin Gormley King Co., Pyrethrum, the natural insecticide. Pyrethrum, the natural insecticide.. ,(1973)
András Fiser, Andrej Šali, Modeller: generation and refinement of homology-based protein structure models. Methods in Enzymology. ,vol. 374, pp. 461- 491 ,(2003) , 10.1016/S0076-6879(03)74020-8
Daniel Dykhuizen, Daniel L. Hartl, Selective Neutrality of 6pgd Allozymes in E. COLI and the Effects of Genetic Background Genetics. ,vol. 96, pp. 801- 817 ,(1980) , 10.1093/GENETICS/96.4.801
Martin A. Nowak, Maarten C. Boerlijst, Jonathan Cooke, John Maynard Smith, Evolution of genetic redundancy Nature. ,vol. 388, pp. 167- 171 ,(1997) , 10.1038/40618
Jianzhi Zhang, Ya-ping Zhang, Helene F. Rosenberg, Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey. Nature Genetics. ,vol. 30, pp. 411- 415 ,(2002) , 10.1038/NG852
R. K. Jansen, J. D. Palmer, A chloroplast DNA inversion marks an ancient evolutionary split in the sunflower family (Asteraceae) Proceedings of the National Academy of Sciences of the United States of America. ,vol. 84, pp. 5818- 5822 ,(1987) , 10.1073/PNAS.84.16.5818
Jianzhi Zhang, Evolution by gene duplication: an update Trends in Ecology and Evolution. ,vol. 18, pp. 292- 298 ,(2003) , 10.1016/S0169-5347(03)00033-8