Detection and Characterization of HIV Type 2 in Calcutta, India
作者： Payel Bhanja , Dibya Kanti Mandal , S. Jana , S.K. Bhattacharya , S. Chakrabarti
DOI: 10.1089/088922204322749549
关键词: Sequence analysis 、 Type (biology) 、 Virology 、 Acquired immunodeficiency syndrome (AIDS) 、 Human immunodeficiency virus (HIV) 、 Phylogenetic tree 、 Strain (biology) 、 Envelope Gene 、 Genetic diversity 、 Biology
摘要: Since the first report of HIV/AIDS in India 1986, continuous serosurveillance has been undertaken all Indian states. Recently, five cases HIV-2 infection have detected Calcutta, situated eastern part India. The full-length envelope gene (2.5 kb) one strains was amplified, cloned, and sequenced. Phylogenetic analysis Calcutta revealed a close relatedness to Rod sequence isolated offshore Senegal. This strain, however, showed genetic diversity 13.5% other isolates.
liebertonline.com参考文章(14)
Saraswathi Nk, Babu Pg, Devapriya F, John Tj, The detection of HIV-2 infection in southern India. Indian Journal of Medical Research. ,vol. 97, pp. 49- 52 ,(1993)
von Eichel U, von Briesen H, Brede Hd, Dietrich U, Maniar Jk, Pfützner A, Rübsamen-Waigmann H, HIV-1 and HIV-2 infections in a high-risk population in Bombay, India: evidence for the spread of HIV-2 and presence of a divergent HIV-1 subtype. Journal of Acquired Immune Deficiency Syndromes. ,vol. 5, pp. 972- 977 ,(1992)
M Grez, U Dietrich, P Balfe, H von Briesen, J K Maniar, G Mahambre, E L Delwart, J I Mullins, H Rübsamen-Waigmann, Genetic analysis of human immunodeficiency virus type 1 and 2 (HIV-1 and HIV-2) mixed infections in India reveals a recent spread of HIV-1 and HIV-2 from a single ancestor for each of these viruses. Journal of Virology. ,vol. 68, pp. 2161- 2168 ,(1994) , 10.1128/JVI.68.4.2161-2168.1994
Sigrid Nick, Carlos A. Diniz, Gottfried Born, Marlies Sauter, Hans W. Pees, Nikolaus Müller-Lantzsch, Gerhard Jahn, Molecular and biological characteristics of a novel HIV-2 isolate, HIV-2HOM Virus Research. ,vol. 29, pp. 267- 279 ,(1993) , 10.1016/0168-1702(93)90066-V
François Clavel, Denise Guétard, Françoise Brun-Vézinet, Sophie Chamaret, Marie-Anne Rey, Maria Odette Santos-Ferreira, Anne G Laurent, Charles Dauguet, Christine Katlama, Christine Rouzioux, David Klatzmann, José Luis Champalimaud, Luc Montagnier, Isolation of a new human retrovirus from West African patients with AIDS Science. ,vol. 233, pp. 343- 346 ,(1986) , 10.1126/SCIENCE.2425430
H. Rübsamen-Waigmann, H.V. Briesen, J.K. Maniar, P.K. Rao, C. Scholz, A. Pfützner, Spread of HIV-2 in India. The Lancet. ,vol. 337, pp. 550- 551 ,(1991) , 10.1016/0140-6736(91)91333-P
V. Soriano, J. Tor, A. Ribera, Human immunodeficiency virus type 2 in Spain European Journal of Clinical Microbiology & Infectious Diseases. ,vol. 8, pp. 568- 568 ,(1989) , 10.1007/BF01967484
Ana Machuca, Vincent Soriano, Mayte Gutiérrez, Africa Holguín, Antonio Aguilera, Estrella Caballero, Gustavo Cilla, Human Immunodeficiency Virus Type 2 Infection in Spain Intervirology. ,vol. 42, pp. 37- 42 ,(1999) , 10.1159/000024958
Ng.B. Singh, S. Panda, T.N. Naik, A. Agarwal, H.L. Singh, Y.I. Singh, B.C. Deb, HIV-2 strikes injecting drug users (IDUs) in India Journal of Infection. ,vol. 31, pp. 49- 50 ,(1995) , 10.1016/S0163-4453(95)91395-5
Motoo Kimura, A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution. ,vol. 16, pp. 111- 120 ,(1980) , 10.1007/BF01731581