Analysis of influenza A H3N2 strains isolated in England during 1995-1996 using polymerase chain reaction restriction.

作者: J. S. Ellis , C. J. Sadler , P. Laidler , H. Rebelo de Andrade , M. C. Zambon

DOI: 10.1002/(SICI)1096-9071(199703)51:3<234::AID-JMV16>3.0.CO;2-K

关键词: VirologyEndonucleaseRestriction mapRestriction enzymeVirusInfluenza A virusOrthomyxoviridaeBiologyAmpliconPolymerase chain reaction

摘要: A polymerase chain reaction-restriction (PCR-restriction) endonuclease assay was developed to allow rapid analysis of influenza H3N2 viruses circulating in England during 1995-1996. Restriction digestion with two enzymes amplicons derived from PCR the HA1 portion haemagglutinin (HA) gene able differentiate antigenically similar strains into groups. Group I variants were genetically 1995/96 vaccine strain, A/Johannesburg/33/94, whereas HA sequences II reference virus A/Thessaloniki/1/95. Of 700 isolated between February 1995 and end April 1996, 384 analysed by this method. PCR-restriction sequential isolates revealed a temporal alteration prevalence variants. Groups cocirculated equal frequency period sporadic activity, but following onset epidemic activity 1995, only detected. PCR- restriction found be method for studying genetic variation which could applied large number samples provide information about direction drift virus.

参考文章(11)
Evolution of influenza virus genes. Molecular Biology and Evolution. ,vol. 2, pp. 289- 303 ,(1985) , 10.1093/OXFORDJOURNALS.MOLBEV.A040352
I. A. Wilson, J. J. Skehel, D. C. Wiley, Structure of the haemagglutinin membrane glycoprotein of influenza virus at 3 A resolution. Nature. ,vol. 289, pp. 366- 373 ,(1981) , 10.1038/289366A0
C. Scholtissek, W. Rohde, V. Von Hoyningen, R. Rott, On the origin of the human influenza virus subtypes H2N2 and H3N2 Virology. ,vol. 87, pp. 13- 20 ,(1978) , 10.1016/0042-6822(78)90153-8
S. Nakajima, K. Nakajima, Y. Takeuchi, A. Sugiura, Influenza Surveillance Based on Oligonucleotide Mapping of RNA of H1N1 Viruses Prevalent in Japan, 1978–1979 The Journal of Infectious Diseases. ,vol. 142, pp. 492- 502 ,(1980) , 10.1093/INFDIS/142.4.492
J. S. Ellis, P. Chakraverty, J. P. Clewley, Genetic and antigenic variation in the haemagglutinin of recently circulating human influenza A (H3N2) viruses in the United Kingdom. Archives of Virology. ,vol. 140, pp. 1889- 1904 ,(1995) , 10.1007/BF01322680
Nancy J. Cox, Catherine A. Bender, The molecular epidemiology of influenza viruses Seminars in Virology. ,vol. 6, pp. 359- 370 ,(1995) , 10.1016/S1044-5773(05)80013-7
D M Fleming, P Chakraverty, C Sadler, P Litton, Combined clinical and virological surveillance of influenza in winters of 1992 and 1993-4. BMJ. ,vol. 311, pp. 290- 291 ,(1995) , 10.1136/BMJ.311.7000.290
R Boom, C J Sol, M M Salimans, C L Jansen, P M Wertheim-van Dillen, J van der Noordaa, Rapid and simple method for purification of nucleic acids. Journal of Clinical Microbiology. ,vol. 28, pp. 495- 503 ,(1990) , 10.1128/JCM.28.3.495-503.1990