Unconstrained gene flow between populations of a widespread epiphytic lichen Usnea subfloridana (Parmeliaceae, Ascomycota) in Estonia.

作者: Polina Degtjarenko , Tiiu Tõrra , Tiina Mandel , Liis Marmor , Andres Saag

DOI: 10.1016/J.FUNBIO.2018.03.013

关键词: MicrosatelliteEvolutionary biologyGenetic diversityParmeliaceaeBiologySpatial heterogeneityUsneaGene flowPopulation geneticsSpecies richness

摘要: Few studies have investigated the genetic diversity of populations common and widespread lichenized fungi using microsatellite markers, especially relationships between different measures environmental heterogeneity. The main aim our study was to investigate population genetics a mainly clonally reproducing Usnea subfloridana at landscape scale, focusing on comparison lichen within hemiboreal forest stands. Particular attention has been paid differentiation in two geographically distinct regions Estonia characteristics diversity. We genotyped 578 thalli from eleven seven specific fungal markers. Measures (allelic richness, Shannon's information index, Nei's unbiased diversity, clonal number multilocus genotypes, private alleles, minimum colonization events) were calculated compared populations. Shared haplotypes, gene flow AMOVA analyses suggest that unconstrained exchange genotypes exist remote Estonia. Stand age, mean circumference host tree, size site tree species composition did not show any significant influence allelic events U. subfloridana Therefore it concluded other factors habitat heterogeneity could probably more effect

参考文章(53)
Silke Werth, Vivian P. W. Miao, Zophonías O. Jónsson, Ólafur S. Andrésson, High-Throughput Sequencing in Studies of Lichen Population Biology Springer, New Delhi. pp. 61- 94 ,(2015) , 10.1007/978-81-322-2235-4_4
R. C. Vrijenhoek, Genetic Diversity and the Ecology of Asexual Populations Population Biology. pp. 175- 197 ,(1990) , 10.1007/978-3-642-74474-7_6
Mónica A.G. Otálora, Rocío Belinchón, María Prieto, Gregorio Aragón, Patricia Izquierdo, Isabel Martínez, The threatened epiphytic lichen Lobaria pulmonaria in the Iberian Peninsula: Genetic diversity and structure across a latitudinal gradient Fungal Biology. ,vol. 119, pp. 802- 811 ,(2015) , 10.1016/J.FUNBIO.2015.05.004
Richard Frankham, David A. Briscoe, Jonathan D. Ballou, Introduction to Conservation Genetics ,(2010)
Christopher J. Ellis, Brian J. Coppins, 19th century woodland structure controls stand-scale epiphyte diversity in present-day Scotland Diversity and Distributions. ,vol. 13, pp. 84- 91 ,(2007) , 10.1111/J.1366-9516.2006.00310.X
Clifford W. Smith, The Lichens of Great Britain and Ireland British Lichen Society. ,(2009)
Godfrey Hewitt, The genetic legacy of the Quaternary ice ages Nature. ,vol. 405, pp. 907- 913 ,(2000) , 10.1038/35016000
Daniel Dieringer, Christian Schlötterer, microsatellite analyser (MSA): a platform independent analysis tool for large microsatellite data sets Molecular Ecology Notes. ,vol. 3, pp. 167- 169 ,(2003) , 10.1046/J.1471-8286.2003.00351.X
Ivar Gjerde, Hans H. Blom, Louise Lindblom, Magne Sætersdal, Fride Høistad Schei, Community assembly in epiphytic lichens in early stages of colonization. Ecology. ,vol. 93, pp. 749- 759 ,(2012) , 10.1890/11-1018.1
Inga Jüriado, Jaan Liira, Daniela Csencsics, Ivo Widmer, Carole Adolf, Kaupo Kohv, Christoph Scheidegger, Dispersal ecology of the endangered woodland lichen Lobaria pulmonaria in managed hemiboreal forest landscape Biodiversity and Conservation. ,vol. 20, pp. 1803- 1819 ,(2011) , 10.1007/S10531-011-0062-8