Dynamical metabolic modelling for lipid accumulation by Yarrowia lipolytica growing on glucose

作者: C.E. Robles-Rodriguez , S.E. Guillouet , C. Bideaux , G. Roux , N. Gorret

DOI: 10.1109/MED.2015.7158846

关键词: Citric acidYeastLipidomicsYield (chemistry)BiomassLipid metabolismBiochemistryYarrowiaSugarChemistry

摘要: The oleaginous yeast Yarrowia lipolytica has been extensively studied due to its capacity accumulate great amounts of lipids triggered by the excess carbon source and limitation nitrogen. However, under these conditions this can also produce citric acid, which decreases lipid conversion yield. Few dynamical models are only available describe metabolism based on mass balances different kinetic configurations. Nevertheless, cybernetic modeling allowed extending optimization through inclusion internal regulation identify controlling steps metabolic fluxes. In present work a dynamic model was developed applied with two variations, compared experimental data carried out in fed-batch cultures Y. glucose as source. Two independent sets regarding nitrogen deficiency were used for parameter estimation. Results show good fit parameters describing dynamics acid production.

参考文章(22)
Fatima Ventura Pereira-Meirelles, Maria Helena Miguez Rocha-Leão, Geraldo Lippel Sant’Anna, A stable lipase from Candida lipolytica Applied Biochemistry and Biotechnology. ,vol. 63, pp. 73- 85 ,(1997) , 10.1007/978-1-4612-2312-2_8
A. Dom�nguez, E. FermiN�n, C. Gaillardin, Yarrowia lipolytica: An Organism Amenable to Genetic Manipulation as a Model for Analyzing Dimorphism in Fungi Dimorphism in Human Pathogenic and Apathogenic Yeasts. ,vol. 5, pp. 151- 172 ,(2000) , 10.1159/000060349
Jin Il Kim, Jeffery D. Varner, Doraiswami Ramkrishna, A hybrid model of anaerobicE. coliGJT001: Combination of elementary flux modes and cybernetic variables Biotechnology Progress. ,vol. 24, pp. 993- 1006 ,(2008) , 10.1002/BTPR.73
Seraphim Papanikolaou, Maria Galiotou-Panayotou, Isabelle Chevalot, Michael Komaitis, Ivan Marc, George Aggelis, Influence of Glucose and Saturated Free-Fatty Acid Mixtures on Citric Acid and Lipid Production by Yarrowia lipolytica Current Microbiology. ,vol. 52, pp. 134- 142 ,(2006) , 10.1007/S00284-005-0223-7
Doraiswami Ramkrishna, Hyun-Seob Song, Dynamic models of metabolism: Review of the cybernetic approach Aiche Journal. ,vol. 58, pp. 986- 997 ,(2012) , 10.1002/AIC.13734
Tigran E. Arzumanov, Igor A. Sidorov, Nadezhda V. Shishkanova, Tatyana V. Finogenova, Mathematical modeling of citric acid production by repeated batch culture. Enzyme and Microbial Technology. ,vol. 26, pp. 826- 833 ,(2000) , 10.1016/S0141-0229(00)00178-2
Seraphim Papanikolaou, George Aggelis, Modeling Lipid Accumulation and Degradation in Yarrowia lipolytica Cultivated on Industrial Fats Current Microbiology. ,vol. 46, pp. 398- 402 ,(2003) , 10.1007/S00284-002-3907-2
Xin Meng, Jianming Yang, Xin Xu, Lei Zhang, Qingjuan Nie, Mo Xian, Biodiesel production from oleaginous microorganisms Renewable Energy. ,vol. 34, pp. 1- 5 ,(2009) , 10.1016/J.RENENE.2008.04.014
André Franz, Hyun-Seob Song, Doraiswami Ramkrishna, Achim Kienle, Experimental and theoretical analysis of poly (β-hydroxybutyrate) formation and consumption in Ralstonia eutropha Biochemical Engineering Journal. ,vol. 55, pp. 49- 58 ,(2011) , 10.1016/J.BEJ.2011.03.006