Analysis of the Dynamic Proteasome Structure by Cross-Linking Mass Spectrometry.
作者： Gunnar Dittmar , Marta L. Mendes
DOI: 10.3390/BIOM11040505
关键词: Structural biology 、 Computational biology 、 Function (biology) 、 Chemistry 、 19S regulatory particle 、 20s proteasome 、 Mass spectrometry 、 Proteasome
摘要: … Cross-linking mass spectrometry (CLMS) has become a well-established methodology that, … provide useful information on proteasome dynamics. Cross-linking was first coupled to mass …
mdpi.com
sci-hub.st 参考文章(63)
Bao Quoc Tran, David R. Goodlett, Young Ah Goo, Advances in protein complex analysis by chemical cross-linking coupled with mass spectrometry (CXMS) and bioinformatics Biochimica et Biophysica Acta. ,vol. 1864, pp. 123- 129 ,(2016) , 10.1016/J.BBAPAP.2015.05.015
Q. Deveraux, V. Ustrell, C. Pickart, M. Rechsteiner, A 26 S protease subunit that binds ubiquitin conjugates. Journal of Biological Chemistry. ,vol. 269, pp. 7059- 7061 ,(1994) , 10.1016/S0021-9258(17)37244-7
Beate C. Braun, Michael Glickman, Regine Kraft, Burkhardt Dahlmann, Peter-M. Kloetzel, Daniel Finley, Marion Schmidt, The base of the proteasome regulatory particle exhibits chaperone-like activity. Nature Cell Biology. ,vol. 1, pp. 221- 226 ,(1999) , 10.1038/12043
Tommy Hofmann, Axel W. Fischer, Jens Meiler, Stefan Kalkhof, Protein structure prediction guided by crosslinking restraints – A systematic evaluation of the impact of the crosslinking spacer length Methods. ,vol. 89, pp. 79- 90 ,(2015) , 10.1016/J.YMETH.2015.05.014
Frank G. Whitby, Eugene I. Masters, Larissa Kramer, J. Randolph Knowlton, Yi Yao, Ching C. Wang, Christopher P. Hill, Structural basis for the activation of 20S proteasomes by 11S regulators Nature. ,vol. 408, pp. 115- 120 ,(2000) , 10.1038/35040607
Wayne Harshbarger, Chase Miller, Chandler Diedrich, James Sacchettini, Crystal Structure of the Human 20S Proteasome in Complex with Carfilzomib. Structure. ,vol. 23, pp. 418- 424 ,(2015) , 10.1016/J.STR.2014.11.017
Juan D. Chavez, Chad R. Weisbrod, Chunxiang Zheng, Jimmy K. Eng, James E. Bruce, Protein Interactions, Post-translational Modifications and Topologies in Human Cells Molecular & Cellular Proteomics. ,vol. 12, pp. 1451- 1467 ,(2013) , 10.1074/MCP.M112.024497
J Lowe, D Stock, B Jap, P Zwickl, W Baumeister, R Huber, Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolution. Science. ,vol. 268, pp. 533- 539 ,(1995) , 10.1126/SCIENCE.7725097
Terry B. Farmer, Richard M. Caprioli, Assessing the multimeric states of proteins: studies using laser desorption mass spectrometry. Journal of Mass Spectrometry. ,vol. 20, pp. 796- 800 ,(1991) , 10.1002/BMS.1200201209
Mary Raule, Fulvia Cerruti, Nadia Benaroudj, Rebekka Migotti, Julia Kikuchi, Angela Bachi, Ami Navon, Gunnar Dittmar, Paolo Cascio, PA28αβ Reduces Size and Increases Hydrophilicity of 20S Immunoproteasome Peptide Products Chemistry & Biology. ,vol. 21, pp. 470- 480 ,(2014) , 10.1016/J.CHEMBIOL.2014.02.006