Integrated approach toward the discovery of glyco-biomarkers of inflammation-related diseases.

作者: Takashi Angata , Reiko Fujinawa , Ayako Kurimoto , Kazuki Nakajima , Masaki Kato

DOI: 10.1111/J.1749-6632.2012.06469.X

关键词: DiseaseBiomarker discoveryBiologyBioinformaticsSystems biologyGenomicsGlycomicsCancerGlycobiologyProteomics

摘要: Glycobiology has contributed tremendously to the discovery and characterization of cancer-related biomarkers containing glycans (i.e., glyco-biomarkers) a more detailed understanding cancer biology. It is now recognized that most chronic diseases involve some elements inflammation; these include cancer, Alzheimer's disease, metabolic syndrome (including consequential diabetes mellitus cardiovascular diseases). By extending knowledge experience glycobiology community regarding biomarker discovery, we should be able contribute diagnostic/prognostic glyco-biomarkers other inflammation. Future integration large-scale "omics"-type data (e.g., genomics, epigenomics, transcriptomics, proteomics, glycomics) with computational model building, or systems approach, will facilitate such efforts.

参考文章(105)
Ajit Varki, Takashi Angata, Siglecs--the major subfamily of I-type lectins. Glycobiology. ,vol. 16, ,(2006) , 10.1093/GLYCOB/CWJ008
M. Yim, T. Ono, T. Irimura, Mutated plant lectin library useful to identify different cells Proceedings of the National Academy of Sciences of the United States of America. ,vol. 98, pp. 2222- 2225 ,(2001) , 10.1073/PNAS.041621998
William E. Klunk, Henry Engler, Agneta Nordberg, Yanming Wang, Gunnar Blomqvist, Daniel P. Holt, Mats Bergström, Irina Savitcheva, Guo-Feng Huang, Sergio Estrada, Birgitta Ausén, Manik L. Debnath, Julien Barletta, Julie C. Price, Johan Sandell, Brian J. Lopresti, Anders Wall, Pernilla Koivisto, Gunnar Antoni, Chester A. Mathis, Bengt Långström, Imaging brain amyloid in Alzheimer's disease with Pittsburgh Compound-B. Annals of Neurology. ,vol. 55, pp. 306- 319 ,(2004) , 10.1002/ANA.20009
Sen-itiroh Hakomori, Tumor-associated carbohydrate antigens defining tumor malignancy: basis for development of anti-cancer vaccines. Advances in Experimental Medicine and Biology. ,vol. 491, pp. 369- 402 ,(2001) , 10.1007/978-1-4615-1267-7_24
Elena M Comelli, Margarida Amado, Steven R Head, James C Paulson, None, Custom microarray for glycobiologists: considerations for glycosyltransferase gene expression profiling. Biochemical Society Symposia. ,vol. 69, pp. 135- 142 ,(2002) , 10.1042/BSS0690135
Richard D Cummings, Marilynn E Etzler, Antibodies and Lectins in Glycan Analysis Cold Spring Harbor Laboratory Press. ,(2009)
Robert A Weinberg, Robert A Weinberg, None, The Biology of Cancer ,(2006)
S Nishihara, H Narimatsu, H Iwasaki, S Yazawa, S Akamatsu, T Ando, T Seno, I Narimatsu, Molecular Genetic Analysis of the Human Lewis Histo-blood Group System* Journal of Biological Chemistry. ,vol. 269, pp. 29271- 29278 ,(1994) , 10.1016/S0021-9258(19)62041-7
繁郎 室, Chronic obstructive pulmonary disease 臨床免疫・アレルギー科. ,vol. 57, pp. 538- 542 ,(2012)