Antigen binding and solubility effects upon the veneering of a camel VHH in framework-2 to mimic a VH

作者: Katja Conrath , Cécile Vincke , Benoît Stijlemans , Joost Schymkowitz , Klaas Decanniere

DOI: 10.1016/J.JMB.2005.04.050

关键词: Single-domain antibodyAmino acidProtein structureImmunoglobulin light chainPeptide sequenceBinding siteProtein Data Bank (RCSB PDB)ChemistryStereochemistryGlycoprotein

摘要: Heavy chain only antibodies of camelids bind their antigens with a single domain, the VHH, which acquired adaptations relative to classical VHs function in absence VL partner. Additional CDR loop conformations, outside canonical structures VHs, broaden repertoire antigen-binding site. The combined effects part CDR3 that folds over "former" binding site and framework-2 mutations more hydrophilic amino acids, enhance solubility VHH domains prevent pairing. cAbAn33, domain specific for carbohydrate moiety variant surface glycoprotein trypanosomes, has short does not cover former as well VH-specific Trp47 instead VHH-specific Gly47. Resurfacing its region (mutations Tyr37Val, Glu44Gly Arg45Leu) mimic human VH restores capacity. In solution, humanised behaves soluble, monomeric entity, albeit reduced thermodynamic stability affinity antigen. Comparison crystal cAbAn33 derivative reveals steric hindrance exerted by residues Tyr37 Arg45 pairing, whereas Glu44 are key elements avoid insolubility domain.

参考文章(48)
Viet Khong Nguyen, Aline Desmyter, Serge Muyldermans, Functional heavy-chain antibodies in Camelidae. Advances in Immunology. ,vol. 79, pp. 261- 296 ,(2001) , 10.1016/S0065-2776(01)79006-2
Zbyszek Otwinowski, Wladek Minor, Processing of X-ray diffraction data collected in oscillation mode Methods in Enzymology. ,vol. 276, pp. 307- 326 ,(1997) , 10.1016/S0076-6879(97)76066-X
Laurent Jespers, Oliver Schon, Leo C. James, Dmitri Veprintsev, Greg Winter, Crystal structure of HEL4, a soluble, refoldable human V(H) single domain with a germ-line scaffold. Journal of Molecular Biology. ,vol. 337, pp. 893- 903 ,(2004) , 10.1016/J.JMB.2004.02.013
Tania Dottorini, Cara K. Vaughan, Martin A. Walsh, Paola LoSurdo, Maurizio Sollazzo, Crystal structure of a human VH: requirements for maintaining a monomeric fragment. Biochemistry. ,vol. 43, pp. 622- 628 ,(2004) , 10.1021/BI035800B
Dirk Saerens, Jörg Kinne, Eugène Bosmans, Ulrich Wernery, Serge Muyldermans, Katja Conrath, Single domain antibodies derived from dromedary lymph node and peripheral blood lymphocytes sensing conformational variants of prostate-specific antigen. Journal of Biological Chemistry. ,vol. 279, pp. 51965- 51972 ,(2004) , 10.1074/JBC.M409292200
Stefan Ewert, Christian Cambillau, Katja Conrath, Andreas Plückthun, Biophysical Properties of Camelid VHH Domains Compared to Those of Human VH3 Domains Biochemistry. ,vol. 41, pp. 3628- 3636 ,(2002) , 10.1021/BI011239A
J Aÿ, T Keitel, G Küttner, H Wessner, C Scholz, M Hahn, W Höhne, Crystal structure of a phage library-derived single-chain Fv fragment complexed with turkey egg-white lysozyme at 2.0 A resolution. Journal of Molecular Biology. ,vol. 301, pp. 239- 246 ,(2000) , 10.1006/JMBI.2000.3971
Marc Lauwereys, Mehdi Arbabi Ghahroudi, Aline Desmyter, Jörg Kinne, Wolfgang Hölzer, Erwin De Genst, Lode Wyns, Serge Muyldermans, Potent enzyme inhibitors derived from dromedary heavy-chain antibodies The EMBO Journal. ,vol. 17, pp. 3512- 3520 ,(1998) , 10.1093/EMBOJ/17.13.3512