tRNASec is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans.

作者: Eric Aeby , Elisabetta Ullu , Hasmik Yepiskoposyan , Bernd Schimanski , Isabel Roditi

DOI: 10.1093/NAR/GKQ345

关键词: BiologyTransfer RNAPolyadenylationSmall nuclear RNAPromoterTranscription (biology)GeneticsRNA polymerase IIIRNA polymeraseRNA polymerase II

摘要: Nuclear-encoded tRNAs are universally transcribed by RNA polymerase III (Pol-III) and contain intragenic promoters. Transcription of vertebrate tRNA(Sec) however requires extragenic promoters similar to Pol-III U6 snRNA. Here, we present a comparative analysis transcription in humans the parasitic protozoa Trypanosoma brucei, two evolutionary highly diverged eukaryotes. RNAi-mediated ablation Pol-II as well oligo-dT induced termination show that human is transcript. In T. brucei protein-coding genes polycistronically processed trans-splicing polyadenylation. tRNA generally clustered between polycistrons. However, trypanosomal embedded within polycistron. Their sensitive α-amanitin Pol-II, but not Pol-III. Ectopic expression outside inside polycistron an added external promoter. These experiments demonstrate tRNA(Sec), contrast its counterpart, Pol-II. Synteny shows trypanosomatids gene can be found different polycistrons, suggesting it has evolved twice independently. Moreover, intron-encoded number eukaryotic genomes indicating may restricted trypanosomatids.

参考文章(46)
Christian Tschudi, Elisabetta Ullut, Unconventional rules of small nuclear RNA transcription and cap modification in trypanosomatids. Gene Expression. ,vol. 10, pp. 3- 16 ,(2002)
Dolph L. Hatfield,, Bradley A. Carlson,, Xue‐Ming Xu,, Heiko Mix,, Vadim N. Gladyshev, Selenocysteine incorporation machinery and the role of selenoproteins in development and health. Progress in Nucleic Acid Research and Molecular Biology. ,vol. 81, pp. 97- 142 ,(2006) , 10.1016/S0079-6603(06)81003-2
Debasish Raha, Zhong Wang, Zarmik Moqtaderi, Linfeng Wu, Guoneng Zhong, Mark Gerstein, Kevin Struhl, Michael Snyder, None, Close association of RNA polymerase II and many transcription factors with Pol III genes Proceedings of the National Academy of Sciences of the United States of America. ,vol. 107, pp. 3639- 3644 ,(2010) , 10.1073/PNAS.0911315106
Evelyne Myslinski, Alain Krol, Philippe Carbon, Optimal tRNA((Ser)Sec) gene activity requires an upstream SPH motif. Nucleic Acids Research. ,vol. 20, pp. 203- 209 ,(1992) , 10.1093/NAR/20.2.203
E. Aeby, S. Palioura, M. Pusnik, J. Marazzi, A. Lieberman, E. Ullu, D. Soll, A. Schneider, The canonical pathway for selenocysteine insertion is dispensable in Trypanosomes. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 106, pp. 5088- 5092 ,(2009) , 10.1073/PNAS.0901575106
Nouria Hernandez, Small nuclear RNA genes: a model system to study fundamental mechanisms of transcription. Journal of Biological Chemistry. ,vol. 276, pp. 26733- 26736 ,(2001) , 10.1074/JBC.R100032200
Elisabette Ullu, Christian Tschudi, Permeable trypanosome cells as a model system for transcription and trans-splicing. Nucleic Acids Research. ,vol. 18, pp. 3319- 3326 ,(1990) , 10.1093/NAR/18.11.3319