Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study

作者: Jerzy Nakielski , Marcin Lipowczan

DOI: 10.1371/JOURNAL.PONE.0084337

关键词: TensorGrowth rateRoot capGeometryRhizodermisApex (geometry)Root (chord)Position (vector)PhysicsBioinformaticsAnisotropyGeneral Biochemistry, Genetics and Molecular BiologyGeneral Agricultural and Biological SciencesGeneral Medicine

摘要: Growth and cellular organization of the Arabidopsis root apex are investigated in various aspects, but still little is known about spatial directional variation growth rates very apical part apex, especially 3D. The present paper aims to fill this gap with aid a computer modelling based on tensor method. typical shape pattern considered. Previously, basis two types empirical data: published velocity profile along axis dimensions cell packets formed lateral cap, displacement field for was determined. Here adopted calculate linear rate different points directions. results interpreted taking principal directions into account. manifests significant anisotropy rate. preferences depend position within apex. In proper periclinal direction predominates everywhere, while cap predominating varies distance from quiescent centre. rhizodermis distinguished neighbouring tissues (cortex, cap) by relatively high contribution anticlinal direction. degree calculated planes defined exemplary walls may be as 25. changes modelled.

参考文章(39)
Jerzy Nakielski, Zygmunt Hejnowicz, The Description of Growth of Plant Organs: A Continuous Approach Based on the Growth Tensor Formal Descriptions of Developing Systems. pp. 119- 136 ,(2003) , 10.1007/978-94-010-0064-2_8
Z. Hejnowicz, John A. Romberger, Calculation of rates of cell division in shoot meristems with reference to the growth tensor Journal of Theoretical Biology. ,vol. 121, pp. 59- 71 ,(1986) , 10.1016/S0022-5193(86)80028-5
Claudia van den Berg, Peter Weisbeek, Ben Scheres, Cell fate and cell differentiation status in the Arabidopsis root Planta. ,vol. 205, pp. 483- 491 ,(1998) , 10.1007/S004250050347
Wendy Kuhn Silk, Ralph O. Erickson, Kinematics of plant growth. Journal of Theoretical Biology. ,vol. 76, pp. 481- 501 ,(1979) , 10.1016/0022-5193(79)90014-6
Richard Kennaway, Enrico Coen, Amelia Green, Andrew Bangham, Generation of diverse biological forms through combinatorial interactions between tissue polarity and growth. PLOS Computational Biology. ,vol. 7, ,(2011) , 10.1371/JOURNAL.PCBI.1002071
Joanna Szymanowska-Pułka, Jerzy Nakielski, The tensor-based model for growth and cell divisions of the root apex. II. Lateral root formation. Planta. ,vol. 232, pp. 1207- 1218 ,(2010) , 10.1007/S00425-010-1239-1
Zygmunt Hejnowicz, Trajectories of principal directions of growth, natural coordinate system in growing plant organ Acta Societatis Botanicorum Poloniae. ,vol. 53, pp. 29- 42 ,(2014) , 10.5586/ASBP.1984.004