Base excision DNA repair.

作者: D. O. Zharkov

DOI: 10.1007/S00018-008-7543-2

关键词: BiologyDNA glycosylaseExcinucleaseBase excision repairComputational biologyBiochemistryAP endonucleaseVery short patch repairAP siteDNA repairNucleotide excision repair

摘要: DNA repair is a collection of several multienzyme, multistep processes keeping the cellular genome intact against genotoxic insults. One these base excision repair, which deals with most ubiquitous lesions in DNA: oxidative damage, alkylation, deamination, sites loss and single-strand breaks, etc. Individual enzymes acting have been identified. The recent years were marked many advances understanding their structure interactions that make functional, versatile system. This review describes current knowledge structural biology biochemistry individual steps subpathways common pathway, process other processes.

参考文章(248)
Wensheng Wang, Laura A. Lindsey-Boltz, Aziz Sancar, Robert A. Bambara, Mechanism of stimulation of human DNA ligase I by the Rad9-Rad1-Hus1 checkpoint complex Journal of Biological Chemistry. ,vol. 281, pp. 20865- 20872 ,(2006) , 10.1074/JBC.M602289200
S. Xanthoudakis, G. G. Miao, T. Curran, The redox and DNA-repair activities of Ref-1 are encoded by nonoverlapping domains Proceedings of the National Academy of Sciences of the United States of America. ,vol. 91, pp. 23- 27 ,(1994) , 10.1073/PNAS.91.1.23
Toshiro Matsuda, Brian J. Vande Berg, Katarzyna Bebenek, Wendy P. Osheroff, Samuel H. Wilson, Thomas A. Kunkel, The Base Substitution Fidelity of DNA Polymerase β-dependent Single Nucleotide Base Excision Repair Journal of Biological Chemistry. ,vol. 278, pp. 25947- 25951 ,(2003) , 10.1074/JBC.C300170200
Grigory L. Dianov, Peter O'Neill, Dudley T. Goodhead, Securing genome stability by orchestrating DNA repair: removal of radiation-induced clustered lesions in DNA. BioEssays. ,vol. 23, pp. 745- 749 ,(2001) , 10.1002/BIES.1104
Stéphanie Marsin, Antonio E. Vidal, Marguerite Sossou, Josiane Ménissier-de Murcia, Florence Le Page, Serge Boiteux, Gilbert de Murcia, J. Pablo Radicella, Role of XRCC1 in the Coordination and Stimulation of Oxidative DNA Damage Repair Initiated by the DNA Glycosylase hOGG1 Journal of Biological Chemistry. ,vol. 278, pp. 44068- 44074 ,(2003) , 10.1074/JBC.M306160200
Masaki Oyama, Mitsuo Wakasugi, Takashi Hama, Hatsuho Hashidume, Yasutaka Iwakami, Rika Imai, Sanae Hoshino, Hiroshi Morioka, Yasuhito Ishigaki, Osamu Nikaido, Tsukasa Matsunaga, Human NTH1 physically interacts with p53 and proliferating cell nuclear antigen. Biochemical and Biophysical Research Communications. ,vol. 321, pp. 183- 191 ,(2004) , 10.1016/J.BBRC.2004.06.136
Isabelle DIONNE, Stephen D. BELL, Characterization of an archaeal family 4 uracil DNA glycosylase and its interaction with PCNA and chromatin proteins Biochemical Journal. ,vol. 387, pp. 859- 863 ,(2005) , 10.1042/BJ20041661
Lee Wiederhold, John B Leppard, Padmini Kedar, Feridoun Karimi-Busheri, Aghdass Rasouli-Nia, Michael Weinfeld, Alan E Tomkinson, Tadahide Izumi, Rajendra Prasad, Samuel H Wilson, Sankar Mitra, Tapas K Hazra, AP endonuclease-independent DNA base excision repair in human cells Molecular Cell. ,vol. 15, pp. 209- 220 ,(2004) , 10.1016/J.MOLCEL.2004.06.003
Aruna S. Jaiswal, Ramesh Balusu, Melissa L. Armas, Chanakya N. Kundu, Satya Narayan, Mechanism of adenomatous polyposis coli (APC)-mediated blockage of long-patch base excision repair. Biochemistry. ,vol. 45, pp. 15903- 15914 ,(2006) , 10.1021/BI0607958