Superresolution live imaging of plant cells using structured illumination microscopy

作者: George Komis , Martin Mistrik , Olga Šamajová , Miroslav Ovečka , Jiri Bartek

DOI: 10.1038/NPROT.2015.083

关键词: Image acquisitionArtificial intelligenceStructured illumination microscopyCalibrationChannel (digital image)MicroscopeLive cell imagingPoint spread functionBiophysicsSuperresolutionComputer visionComputer science

摘要: This protocol describes a detailed method for superresolution imaging of plant tissues by structured illumination microscopy (SIM). Details include microscope calibration, tissue preparation, image acquisition and evaluation SIM images. Although (SR) approaches have been routinely used fixed or living material from other organisms, the use time-lapse (SIM) in cells still remains under-developed. Here we describe validated that focuses on cortical microtubules different cell types. By using one existing commercially available platforms, provide user-friendly easy-to-follow may be widely applied to cells. includes steps describing calibration channel alignment, generation an experimental point spread function (PSF), preparation appropriate observation chambers with material, acquisition, reconstruction validation. can carried out within two three working days.

参考文章(55)
Christian Eggeling, Stefan W. Hell, STED Fluorescence Nanoscopy Springer Series on Fluorescence. pp. 3- 25 ,(2014) , 10.1007/4243_2014_75
Malte Renz, Fluorescence microscopy-a historical and technical perspective. Cytometry Part A. ,vol. 83, pp. 767- 779 ,(2013) , 10.1002/CYTO.A.22295
James M. Kasuboski, Yury J. Sigal, Matthew S. Joens, Bjorn F. Lillemeier, James A.J. Fitzpatrick, Super‐Resolution Microscopy: A Comparative Treatment Current Protocols in Cytometry. ,vol. 62, ,(2012) , 10.1002/0471142956.CY0217S62
William N. Hurwitz, Harry M. Hansen, William G. Madow, Methods and applications Wiley. ,(1953)
Jolien S. Verdaasdonk, Andrew D. Stephens, Julian Haase, Kerry Bloom, Bending the Rules: Widefield Microscopy and the Abbe Limit of Resolution Journal of Cellular Physiology. ,vol. 229, pp. 132- 138 ,(2014) , 10.1002/JCP.24439
Samantha Stehbens, Hayley Pemble, Lyndsay Murrow, Torsten Wittmann, Imaging intracellular protein dynamics by spinning disk confocal microscopy. Methods in Enzymology. ,vol. 504, pp. 293- 313 ,(2012) , 10.1016/B978-0-12-391857-4.00015-X
Henrik Buschmann, Adrian Sambade, Edouard Pesquet, Grant Calder, Clive W. Lloyd, Microtubule Dynamics in Plant Cells Microtubules: in vivo. ,vol. 97, pp. 373- 400 ,(2010) , 10.1016/S0091-679X(10)97020-9
Eugenio F. Fornasiero, Felipe Opazo, Super-resolution imaging for cell biologists BioEssays. ,vol. 37, pp. 436- 451 ,(2015) , 10.1002/BIES.201400170
Sidney L Shaw, Roheena Kamyar, David W Ehrhardt, Sustained Microtubule Treadmilling in Arabidopsis Cortical Arrays Science. ,vol. 300, pp. 1715- 1718 ,(2003) , 10.1126/SCIENCE.1083529
Oliver Griesbeck, Geoffrey S. Baird, Robert E. Campbell, David A. Zacharias, Roger Y. Tsien, Reducing the Environmental Sensitivity of Yellow Fluorescent Protein MECHANISM AND APPLICATIONS Journal of Biological Chemistry. ,vol. 276, pp. 29188- 29194 ,(2001) , 10.1074/JBC.M102815200