Method for genetic detection using interspersed genetic elements: a multiplexed DNA analysis system

作者: Sudhir Sinha

DOI:

关键词: MultiplexGeneticsIdentification (biology)BiologyAmelogeninComputational biologyRetrotransposonAmpliconAlleleGene duplicationDNA

摘要: By utilizing a Mini-Primer strategy targeting the target site duplication (TSD) sequence of retrotransposons, INNUL markers, which include SINEs, LINEs, and SVAs, can be effectively used as markers for human identification bio-ancestry studies regardless size inserted element. The amplicons INNULs difference between allelic states reduced substantially such that these have utility analyzing high low quality DNA samples. A 15 RE marker Amelogenin (for sex determination) multiplex single tube amplification DNA, in four color detection was successfully designed. provided power discrimination suitable forensic paternity analysis. In addition, sensitivity enable identity on anthropological Depending distribution alleles global populations, selected testing or studies.

参考文章(55)
Lori Hennessy, Chien-Wei Chang, X-STR multiplex PCR amplification system ,(2011)
Marcia J. LaFountain, Margaret B. Schwartz, Pamela A. Svete, Mary A. Walkinshaw, Eric Buel, TWGDAM Validation of the AmpFℓSTR Profiler Plus and AmpF∓STR COfiler STR Multiplex Systems Using Capillary Electrophoresis Journal of Forensic Sciences. ,vol. 46, pp. 1191- 1198 ,(2001) , 10.1520/JFS15120J
Katherine A. Micka, Cynthia J. Sprecher, Ann M. Lins, Catherine Theisen Comey, Barbara W. Koons, Cecelia Crouse, Debra Endean, Kevin Pirelli, Steven B. Lee, Nicola Duda, Maosheng Ma, James W. Schumm, Validation of multiplex polymorphic STR amplification sets developed for personal identification applications. Journal of Forensic Sciences. ,vol. 41, pp. 582- 590 ,(1996) , 10.1520/JFS13959J
A Sajantila, Ann-Christine Syvänen, M Lukka, Identification of individuals by analysis of biallelic DNA markers, using PCR and solid-phase minisequencing. American Journal of Human Genetics. ,vol. 52, pp. 46- 59 ,(1993)
Mark D. Shriver, Joshua M. Akey, Ranjan Deka, Robert E. Ferrell, Michael W. Smith, Amy Marcini, Li Jin, Ethnic-affiliation estimation by use of population-specific DNA markers. American Journal of Human Genetics. ,vol. 60, pp. 957- 964 ,(1997)
Dae Sik Lee, Yun Tae Kim, Yong Beom Shin, Se Ho Park, Sung Jin Kim, Tae Hwan Yoon, Hae Sik Yang, Kyu Won Kim, Method for performing multiplex PCR with cyclic changes of PCR parameters ,(2003)
Ellen Heitzer, Martina Auer, Eva Maria Hoffmann, Martin Pichler, Christin Gasch, Peter Ulz, Sigurd Lax, Julie Waldispuehl‐Geigl, Oliver Mauermann, Sumitra Mohan, Gunda Pristauz, Carolin Lackner, Gerald Höfler, Florian Eisner, Edgar Petru, Heinz Sill, Hellmut Samonigg, Klaus Pantel, Sabine Riethdorf, Thomas Bauernhofer, Jochen B. Geigl, Michael R. Speicher, Establishment of tumor‐specific copy number alterations from plasma DNA of patients with cancer International Journal of Cancer. ,vol. 133, pp. 346- 356 ,(2013) , 10.1002/IJC.28030
Philippe Gilbert Lacroute, Michael Dodd, Bernhard Zimmermann, Matthew M. Hill, Highly multiplex pcr methods and compositions ,(2012)